Gene PHATRDRAFT_42534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_42534 
Symbol 
ID7196084 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand- 
Start bp338299 
End bp339038 
Gene Length740 bp 
Protein Length140 aa 
Translation table 
GC content42% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177073 
Protein GI219110643 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.288065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGTAT CGGTCCGATG GTCAAAATAC TGGAATGTGT ATTTGTACAA GTCTGGCGAA 
AAGGACCTGT CAGACAAGCT CGAGGCTTTG TACGAAAATG AGCAATTAGG TCCACTTTTG 
GAAGGCAATG ACCATTGGCA AATTGGAAAG GGCGAGAAGG AGTCAACTTA TTTTGAATGT 
TCGCTACCAA GTGAGTGAGC CACCAATTGT TCAGAAAAGT AATTTTTGGG GGTTGTGGTC 
TTTGAAAACG TATGGGATCT GGAATAGTAC CACAAGAAAA GCAATTGATC CAGAAGCAAG 
TGGTAGCCTA CATGAGGAAA TTAAACTATC CCAGGAACAT GTACCTCATG ATGGATTGAG 
TAAAGGTGAA GCAGGAATGG ACAACTCTGG TGATGATATG GATCTATCAG TGGAGGTGGA 
AGAATTGCAA ATGAAAGTAA GTCAATCAGG AACAAATCCT TTTACACACA ATCTACATCT 
CTACAACGAA ATGTCGAAGT TGGCTAGATT TGATTCTGAA GCCGCAGAAC TAATGACTGA 
AATTCTGCAA CAAGGCCTTG CAGAAATGCA AGGCAGTGTT GCTACAAGGG TTGGGGCCAC 
AGATTGCAGT ATTGGACCAG CTATTGGGAA CGAACGGATA GGTCAATGGC TAAAACCAAA 
CTATAGTCCT TCAAAAGGAA ATTGAATGCG AAAACGAAAG AAGAAAAGAA AGGATTCCCC 
TCTAGGAAGT GGATAAATGC
 
Protein sequence
MDVSVRWSKY WNVYLYKSGE KDLSDKLEAL YENEQLGPLL EGNDHWQIGK GEKESTYFEC 
SLPTIDPEAS GSLHEEIKLS QEHVPHDGLS KGEAGMDNSG DDMDLSVEVE ELQMKKCKAV 
LLQGLGPQIA VLDQLLGTNG