Gene PHATRDRAFT_42514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_42514 
Symbol 
ID7196689 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp270541 
End bp271947 
Gene Length1407 bp 
Protein Length256 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177052 
Protein GI219110601 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGCGAACAAA TCATAGAGAA TCTGCAAGCA CTAGGGACCA TGACGACTAC TTCATCGAAG 
CGTAGCATTA CAGAGAGCGA AGATAGTTCC CTGTCAGACT CAGCATCAGG AGGCGGAGAT
GAAAAAACGA TCCCATTTTT AAGGTGAGTC GAGTTGTAGT GATTCTCGTT GATGCCAATG
GTGGGAATGA GAAAGGGGAA AATTCGCCTT CTACAGCGAA GGAATTTGTG GACATCGAGG
TTGTTGCGAG GCCAGACGAT ACAATTCCCC GAATGTACTG CTTTCGACTT ACAAAAGGTA
TTGTCGATGT GTGTGAGCTC ATGGCTGGAA AGTGTTCGCT GTCGACGGAA AAGACGAAGG
ACATCAAAAG AGAGTTTCCC ATCGTGGCGA TCCATCACCT AAACCCATAA CCTGGATCTC
CATCAACCGA GTCGCCTCAC GGCACAACGG AAGATACCAC AAGTTTTCTC ATCTTTATGA
ATTTGAAGTT ATTACGAATA TAGTCTCACC TACTATCCTC TTCTATCTTC AGACGTCTAC
GGGATATGCT GCTGGAGAAC GACGACGTAA TTTCCTTTTC TCCTGGGTGT GAGTAGCTTT
CACTATTTGT TCTTGCCACA TTTTGCCGCT AAGTTACGCC GAGAGCTTTT CTCACGTATC
CTTATTTTAT TTTATTGCAG ATCTTAGCGA CGGAAAAAGG GTTTTGGGAC GTCTTATTGT
ACACGATCGA CTGACAGTAG AGGCGAAAGT GTTGCCACGA TATTTCAACC ACTCCTCTTT
TGCGTCGCTA CGCCGGCAAT TGAACTATTT CAGTTTCGTA AGAGTTGGCA AGGGTCGTCA
AAGGGAATCG ACTTACATCA ATGAAGATGT TGTAGATCTC AACGACATTC TGCATCTCAA
ACGTCGTCCC GCATCCGCTG GGCTTGCGAT AAATACCGCG ATAGTTACGC AACATTTGGA
AACTGATCTT GGCTCCATGG AAAGCAGATA TGTGGACTCG ATCGTGCCCG TCGTGCACTT
GAAACCACAT TATCTTGGTA GCACCGCTCC TGTCAAGAAG CATGCCAAAC GTCAGCGGCT
AACACCGAAG CTTCTTCGCT GTGACCGTTC TTCACCTCCT GCAACGTCAT CATTAAACAA
CTTTGTCAGT GAAGACGAGC ACTCGGAAAC AAAGCGCCAT TACATTGCTC TGGATCTAAC
CAAGTCTTCA TTGGTCTCCA GAGTGGATGA AGACGATGTG TTGGCCGGTT GCAGTGCCCT
GCTAGGCTTG GCCCGAAGGT CTTGGGAGTA GGAATCTGGT TTTTGAAGGG AGAAGCACCT
TCTTTCGTTT TTGATGAAAG CATTGACAAT GTTTCTTTGT ATTGTATATT GTCATAATCG
AAGTAAATTC ATGCTTGTAC ACTGGTT
 
Protein sequence
MTTTSSKRSI TESEDSSLSD SASGGGDEKT IPFLRRLRDM LLENDDVISF SPGYLSDGKR 
VLGRLIVHDR LTVEAKVLPR YFNHSSFASL RRQLNYFSFV RVGKGRQRES TYINEDVVDL
NDILHLKRRP ASAGLAINTA IVTQHLETDL GSMESRYVDS IVPVVHLKPH YLGSTAPVKK
HAKRQRLTPK LLRCDRSSPP ATSSLNNFVS EDEHSETKRH YIALDLTKSS LVSRVDEDDV
LAGCSALLGL ARRSWE