Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_42514 |
Symbol | |
ID | 7196689 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 270541 |
End bp | 271947 |
Gene Length | 1407 bp |
Protein Length | 256 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177052 |
Protein GI | 219110601 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AGCGAACAAA TCATAGAGAA TCTGCAAGCA CTAGGGACCA TGACGACTAC TTCATCGAAG CGTAGCATTA CAGAGAGCGA AGATAGTTCC CTGTCAGACT CAGCATCAGG AGGCGGAGAT GAAAAAACGA TCCCATTTTT AAGGTGAGTC GAGTTGTAGT GATTCTCGTT GATGCCAATG GTGGGAATGA GAAAGGGGAA AATTCGCCTT CTACAGCGAA GGAATTTGTG GACATCGAGG TTGTTGCGAG GCCAGACGAT ACAATTCCCC GAATGTACTG CTTTCGACTT ACAAAAGGTA TTGTCGATGT GTGTGAGCTC ATGGCTGGAA AGTGTTCGCT GTCGACGGAA AAGACGAAGG ACATCAAAAG AGAGTTTCCC ATCGTGGCGA TCCATCACCT AAACCCATAA CCTGGATCTC CATCAACCGA GTCGCCTCAC GGCACAACGG AAGATACCAC AAGTTTTCTC ATCTTTATGA ATTTGAAGTT ATTACGAATA TAGTCTCACC TACTATCCTC TTCTATCTTC AGACGTCTAC GGGATATGCT GCTGGAGAAC GACGACGTAA TTTCCTTTTC TCCTGGGTGT GAGTAGCTTT CACTATTTGT TCTTGCCACA TTTTGCCGCT AAGTTACGCC GAGAGCTTTT CTCACGTATC CTTATTTTAT TTTATTGCAG ATCTTAGCGA CGGAAAAAGG GTTTTGGGAC GTCTTATTGT ACACGATCGA CTGACAGTAG AGGCGAAAGT GTTGCCACGA TATTTCAACC ACTCCTCTTT TGCGTCGCTA CGCCGGCAAT TGAACTATTT CAGTTTCGTA AGAGTTGGCA AGGGTCGTCA AAGGGAATCG ACTTACATCA ATGAAGATGT TGTAGATCTC AACGACATTC TGCATCTCAA ACGTCGTCCC GCATCCGCTG GGCTTGCGAT AAATACCGCG ATAGTTACGC AACATTTGGA AACTGATCTT GGCTCCATGG AAAGCAGATA TGTGGACTCG ATCGTGCCCG TCGTGCACTT GAAACCACAT TATCTTGGTA GCACCGCTCC TGTCAAGAAG CATGCCAAAC GTCAGCGGCT AACACCGAAG CTTCTTCGCT GTGACCGTTC TTCACCTCCT GCAACGTCAT CATTAAACAA CTTTGTCAGT GAAGACGAGC ACTCGGAAAC AAAGCGCCAT TACATTGCTC TGGATCTAAC CAAGTCTTCA TTGGTCTCCA GAGTGGATGA AGACGATGTG TTGGCCGGTT GCAGTGCCCT GCTAGGCTTG GCCCGAAGGT CTTGGGAGTA GGAATCTGGT TTTTGAAGGG AGAAGCACCT TCTTTCGTTT TTGATGAAAG CATTGACAAT GTTTCTTTGT ATTGTATATT GTCATAATCG AAGTAAATTC ATGCTTGTAC ACTGGTT
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Protein sequence | MTTTSSKRSI TESEDSSLSD SASGGGDEKT IPFLRRLRDM LLENDDVISF SPGYLSDGKR VLGRLIVHDR LTVEAKVLPR YFNHSSFASL RRQLNYFSFV RVGKGRQRES TYINEDVVDL NDILHLKRRP ASAGLAINTA IVTQHLETDL GSMESRYVDS IVPVVHLKPH YLGSTAPVKK HAKRQRLTPK LLRCDRSSPP ATSSLNNFVS EDEHSETKRH YIALDLTKSS LVSRVDEDDV LAGCSALLGL ARRSWE
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