Gene PHATRDRAFT_42494 details

Gene Information

• Locus tag: PHATRDRAFT_42494
• ID: 7196054
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: +
• Start bp: 211490
• End bp: 214274
• Gene Length: 2785 bp
• Protein Length: 813 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002176546
• Protein GI: 219109583

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATCAACGAGA AGCGCAGAGA CGATCCGTTT GTCGCAGAGG ATCGGTATCG AATCGAACCT 
AGACGGGTAG TTATTGTGCA CAAAACGTAC GCCCACCTCA CCCGTTGCTC GACTATCACA 
AGCTTACAGT TAGTTCCTTC ATCCGTTTAT CGTCCACCAA TAGATACGAT TCGCAATCGT 
AACAAAACAC TCTGCAAAAA TCCCATTGGT AGCACAGCTG TGATTTGGAA ACCTAAAGAA 
TGAAGATTTC GCAATCCGCA CTCAGTGTGT TGCTGTTGTG CACTTCGGCG GCGGCCTTCG 
TGCCGTCACG TCCGACGCTA TCCCGCATTT CCACGACGTC TACGATCGCC AACGCGGCGA 
CGAAGCAGGA CGCCGATATT GCGGTACCGT ACGACGCTGC AGCGCGTTTG GCCTACGACG 
AATGGCGCAA CAAATACAGT AAGGGAGATT TCGACGCTAC ACGATACGAA TTTTTCAAAA 
ACAACTACGA AACCATTACT ATTGCCAACG TTGTAGCCAA AAAGGAAGCC CGGGAGCAGA 
AGAAGGACGC CGTCCCACTC ATGACACTCA ACGAGTTTGG GGACTTTTCC GAAGAGGAAT 
TTAAAGCTCG CCAAAGTGGA GACAAACCAG CCGCCTCCGA TACGAAGACT ATATCGACGG 
GTGACGTGCT CGGCAAGGCC GTAGCTGCAG CGGAAAAGCA ATCGGAAGCC AGTGGAGCGC 
TGAAGGAAGC AGCCGACGCG TTGGCGGAAG ACGAAGAGGT GTGTGGTGAA TTGATTTCTT 
GTCTTCGTCC TCCTGTATAT TTTGTAATGC ACAGTCAATC GTTTTGTCCA ACATGAACCA 
TCCCATTCTC ACCCAATCTT AGGCTCTGGC ACAGAAGCTT GGACTGCAGT CGGTGGAGGA 
GTTGGAAGTG GCGATCGATA GTCTCGAAGG CATTGCTGCC GACGGTGGGG AGCTGGATAA 
GGAAAATCTG TCTCGCGAGG CCCGTGTACG AGCCGCCTAC TTGAACTGGT GTAAGGAATA 
CAAAAAGGAA CCAGACGAGG ATCGCTTTCT CGCCTTTTCC GACAATTTTC TCGTCATGGA 
AAAATTTGCA CAAGACACGG GTAAGGAAAT GGCACTTAAC GAGTACGCGG ACTTGACTGA 
AACAGAGTAC AAGGAAAAAT TTGCCACGAA GAGCAAACCT AAAAAGGAGA CCACGCCCGC 
CGTTAGTAAG AACGCTACTC CTTCCAGCAA AGTCAAAGTA GCGGAGGTTG TGAAAAATCT 
GTTCACCCCT GCCGTAGAGA CTCCGGCAGA GAAGGTGGAA CGGGAAACAC GCGCCAAGGC 
GATTGCCGAG CAGCGCAAAG CCCAGGAAGC TGCTGATGCG ACTCGTCGTC AGGACATTGA 
GAAGGAGCGT GCCGAGCGCC AAAAGCAGCA AGACCAGGAA CTTGCAAAAG CGAAGACAAC 
GACGGAGCAA GCTGTCATTG CAGCGGCGAA GGAAGAAGCG GAACGGGAAG CTCAGAAGAA 
CGCGGCACGT CGAAAGATTG AACAGCAAGC GGCGGAGCAA GCTCGACAAA AGGCACGGGA 
ATGGGACGAA AAACAAAAGA AGATGTCCGT CTCCTCCACG CAGTCGCTGA AGAAGACCGA 
GCCCAAGCCT GCACCCACTT TGGATTTGAG CTCTTTCTTT CCCACTCCGG CGCCGCAAAA 
GGAGGCAGCC CCTGATCCAG CAAAGGCCAA AGTAGAAGCC CCGAAGAAAA AGGCGCCCTC 
TACTCCCAGT TTTGGAAGCT TCTTCTCACC TCCATCCCCG AAAACGGTCC CCGCACCCAA 
AGCGGCTCCC GCTCCAGTGC CTACGCCTGT GAAAACTAAA AAACCTACCG TGAAATCTTC 
ACCAACATTC AACTTAGGTT CTTTCTTTGC GCCGTCCCCG GCGCCGAAAC AGAAGGAAGC 
TCCTCAGCCC GCCCCGATTG TGGAATCGGA AGAAGTTGAT GTTGCCGACC CTGTTACGGA 
GGCTTTCAAC TCTTTTTTTG GATCGGGAAA AAAGAAGACA GAGCCAAAGC CCTCTCCGGC 
TCCAGCCCCC GTCAAGAAAG CTCCTGTCAA GTCGAACCCA ACTTTTTCAT TTTTTTCTCC 
TCCCACACCA GCTCCCGCAC CGAAGCCAGC CCCAGCACCT GTACCGAGTA AAGCAAATCC 
AACATTTTCT TTCTTTTCCC CTCCTAAGCC GGCTCCCACC AAGAAAGAGG AGCCCAAGGT 
ACCCAACCGA CCCGGTACAC TGAGCTTATT CGATTTTTCT CCCAAGCCTG GCCCCGAGAA 
GGAGGATAAA CCTAAGATGT CCAATCGACC GGGTACTCTG AGTTTGTTTG GATCTGGCAC 
TCCCAATAAG GACCCTAAGC CGGAGAAAAG GGTACAACCA AAGGTCCCCA ACCGCAAAGG 
GACCATCAGT TTGTTTGGCG GTAACGCCAA AACGCCGACC CCCGCTCCGC AAAAAAAGAA 
GGAACCGGTT AAGAGACCAA CTCTTTCGCT ATTCGGTTCC CCCAAGAAGA AAGAACCGGA 
AATCGCTCCG GAGCCGGTCA AACAAAAACA GGCCTTTTCC TTTTTCGGTG GAGGCGGTGG 
TTCCAAATCT GCAGCAGCAC CCAAGGATAA GATTCCTGTG TTGAGTCGTT GGAAGCAAAA 
TCCCAACGGT TCCATTACTG GTATCATCAG CAATTCTCCC AATTTCCGCA GCGGGACGGA 
GATTACTACA TCCCCCGTCA AACGGGGAGC CAAGGCAGGG AGCGTAATCA AGACGGGGTC 
CGGTTCGCAG TATCGACTTT CGTAA 

 

Protein sequence

MKISQSALSV LLLCTSAAAF VPSRPTLSRI STTSTIANAA TKQDADIAVP YDAAARLAYD 
EWRNKYSKGD FDATRYEFFK NNYETITIAN VVAKKEAREQ KKDAVPLMTL NEFGDFSEEE 
FKARQSGDKP AASDTKTIST GDVLGKAVAA AEKQSEASGA LKEAADALAE DEEALAQKLG 
LQSVEELEVA IDSLEGIAAD GGELDKENLS REARVRAAYL NWCKEYKKEP DEDRFLAFSD 
NFLVMEKFAQ DTGKEMALNE YADLTETEYK EKFATKSKPK KETTPAVSKN ATPSSKVKVA 
EVVKNLFTPA VETPAEKVER ETRAKAIAEQ RKAQEAADAT RRQDIEKERA ERQKQQDQEL 
AKAKTTTEQA VIAAAKEEAE REAQKNAARR KIEQQAAEQA RQKAREWDEK QKKMSVSSTQ 
SLKKTEPKPA PTLDLSSFFP TPAPQKEAAP DPAKAKVEAP KKKAPSTPSF GSFFSPPSPK 
TVPAPKAAPA PVPTPVKTKK PTVKSSPTFN LGSFFAPSPA PKQKEAPQPA PIVESEEVDV 
ADPVTEAFNS FFGSGKKKTE PKPSPAPAPV KKAPVKSNPT FSFFSPPTPA PAPKPAPAPV 
PSKANPTFSF FSPPKPAPTK KEEPKVPNRP GTLSLFDFSP KPGPEKEDKP KMSNRPGTLS 
LFGSGTPNKD PKPEKRVQPK VPNRKGTISL FGGNAKTPTP APQKKKEPVK RPTLSLFGSP 
KKKEPEIAPE PVKQKQAFSF FGGGGGSKSA AAPKDKIPVL SRWKQNPNGS ITGIISNSPN 
FRSGTEITTS PVKRGAKAGS VIKTGSGSQY RLS