| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42478 |
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| Symbol | |
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| ID | 7196668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 176450 |
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| End bp | 178993 |
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| Gene Length | 2544 bp |
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| Protein Length | 809 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002176536 |
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| Protein GI | 219109563 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.300834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTTTTTGGAG ACCAGAACAC TTTCTGTCAG TATCGACACC GTAATCTCCC TCGAGCGTGT
CCACTGGAGC AGTACATGGG GCGACAATAG ATTGTGACTT GCTGTTCGTA GGAAATGTAC
AGCAGTAGGG GTTCTACGGC GCCAATCGCC CCAGTCCAGC CCAAAATTCT CGGTGAAATT
CTGCTACCCG ATTCAAAAGA CTACAAATTG TACTGCTGGA AAGTACGGAA TGGGTCTTCC
GTACGAAAAG GAGAGACAGT GGCACTCGCA ATCCACAGAG ACGGCAGCAA CGGCTTGGGC
TCGTCTGAAG CGGGCGCAGT ATCATCGTCT TTGCCAACAT CCCAAACCCC ATCTACTGCT
ACACAGCCAG CCTCCTCCAA CAGATCGCAA TATAAGCGAC CGACGAAACG AAGAAAACAC
GTTGTACAAT CACCTGATGG CGATGCCGAA ACCATAATGG ACGAGAAGCC TGCAGCGGAT
ACAAAAAAGG CTTCGAATGC CACCGCCAAC AACGTTGCTC CTGCCACACC GTTGACGCCT
GCCCCTACTT CCGACTCAAT TTCGGCGTCC GAGAAGATAC CGATTCTGGC GACAGCGGAT
GGTTTGGTTC GCATGGGAAG ATTAGAGGGA ATTCATCAGC AACATGATGT TCTTATCGGT
TTCATCGAGG AGTGTACCCA TCCAACCGTT ATAGACGGTC TTTGTGCCGT GTGTGGCAAG
TCTGTAGACA AAACAAAGAC ACCGGGCGAA GCATCGCACT CGGAGCAATC GCCTCAGTCA
GACATGTCAC GGGTCACCGT TTCGGGACAT ACCGTCACTG TGTCGCGCGC GGAAGGTCAA
CGAATGGCAC AACAAGATGC GGAGCGGCTA CAAAAGCGAA AGAAGCTGTC GCTCGTTCTC
GATCTCGATC ATACTCTGGT ACACGCTACA AACGATACTC GTGCCCAACA ATTTTGCAAA
TCTCGGGACG ATGTGCGAAC TCTTATTCTA CCAATGTTAC GTCCCAATGG GGAACCGCGG
CAGCCGCAAC ATCCCGAATG GACGCAACAT TTTGTCAAGA TGAGACCGCA CGTGGAAGTA
TTCTTGAACG AAGCCCAGGA CCAATACGAA ATTGGTGTAT ATACTGCCGG AACAAGAGAC
TACGCCGAAC AAATTTGCAT TTTGCTGTGC CGGCACTTAC TGGGGGTTTC GCGGGACCAG
CCAGAAATGG ATATGTTGCG ATACCGGATT GTTAAAATGG AACAGGCACT TTTCCAGTCG
ACATCATGCG CGGACCCAGA GGAGCACGAA CCTACTCGCG CATCCGAATC TCTTGAAGCA
CCACTACCAA GTGTGGATCG TTCGCACGAG AATGGTGGGA CGAATACGCT ATCCGACGAG
GCAAAACACG GCGTGGACCC AGAGGAGTAC GACCGTGCAC AGGCATCCGA GCCCCTTGAA
GCACCATTAT CAAGTGTGGA TCTTTCGCAC AATAATGGTT TGACGAATAC GACGTTACCC
GACGAGGCAG AACACGCTGG ATCTAAACGC AAACGAGTAA CGTTTGGGGC TAGTCCAGAT
GAAGCCAAAT CAGATGGCCC ATCGGCAATG AATCTTGAAA AGCTCAAGAC AGAGCTACGA
GAAGCGCAAG CCCTGGAGGA CAAGGTACTG GAACTGCGGC AGCGTTTGTT TGGGAGCCGA
ATAGTGTCTC GAACCGACGT TAGAGACTTG GGTCAGAATG TAAAAAGTTT GAAACGAATA
TTTCCTTGCG GTGGAATCAT GGCGGTGGTA ATGGATGATC GGGAAGATGT ATGGGCCAAT
GCAGCAGACA TTTTGACCGT TCGAAAGGGC GAACCACCCG ACAATCTTTT GCTTGTACGA
CCTTATCATT GGAGTTCCTT TTTGGGGTTT GCGGACGTGA ACAATGCTTC CGGTGCTGAC
CTGTCCGGAG AAAGTGAGGC GGGCGACGTC GAGACGGACG AGCAATTGTT GTGGTCACTC
GATATTTTGC AGCGGGTTCA CCGTCGCTTC TACGAATCGG ATGGCAGCTT CCTTGGTGCT
CTTACCCAGA CGGTCCCCGA TATCGTCAAG CAATTGCGAG CGGAAACACT GCATGGCGCG
CATCTGGTAT TTTCGGGAAT GGTTCCGTTA CACCGACAGC AACAGCAACT AGAGTCCGGC
GACAAAGTAG TTCCCCGACC GACCGTGATT CGCTATGCCG AAACGCTCGG GGCCAAGGTA
TGGTCCAAAG TTACACCTGT GCTCACCCAC GTCGTGGCGG CGAAAGATGG AACTGACAAA
ATTTTGGCAG CGCGAAAGCT TCCGGGATGC AGGATTGTCA AGCCAGGGTG GTTGATGGAG
TGCGTGTGGA GTTTGACGAG GCGAGACGAA GGCCGGTATT TGCTGGGTGA TGCATCTCCG
CGATTCTCGG AACTCCGCAC ACCACTGTCC GAGTATTCGA CCGCTAAGGA AAATTCGTCT
AGTGAACTTG ACGATGATTC GGAAGATGAC GACTTGGCCG CCCAATTTGA AAGCGAATTA
ATGGAAGAAG AGGAATACGT ATAA
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| Protein sequence | MYSSRGSTAP IAPVQPKILG EILLPDSKDY KLYCWKVRNG SSVRKGETVA LAIHRDGSNG
LGSSEAGAVS SSLPTSQTPS TATQPASSNR SQYKRPTKRR KHVVQSPDGD AETIMDEKPA
ADTKKASNAT ANNVAPATPL TPAPTSDSIS ASEKIPILAT ADGLVRMGRL EGIHQQHDVL
IGFIEECTHP TVIDGLCAVC GKSVDKTKTP GEASHSEQSP QSDMSRVTVS GHTVTVSRAE
GQRMAQQDAE RLQKRKKLSL VLDLDHTLVH ATNDTRAQQF CKSRDDVRTL ILPMLRPNGE
PRQPQHPEWT QHFVKMRPHV EVFLNEAQDQ YEIGVYTAGT RDYAEQICIL LCRHLLGVSR
DQPEMDMLRY RIVKMEQALF QSTSCADPEE HEPTRASESL EAPLPSVDRS HENGGTNTLS
DEAKHGVDPE EYDRAQASEP LEAPLSSVDL SHNNGLTNTT LPDEAEHAGS KRKRVTFGAS
PDEAKSDGPS AMNLEKLKTE LREAQALEDK VLELRQRLFG SRIVSRTDVR DLGQNVKSLK
RIFPCGGIMA VVMDDREDVW ANAADILTVR KGEPPDNLLL VRPYHWSSFL GFADVNNASG
ADLSGESEAG DVETDEQLLW SLDILQRVHR RFYESDGSFL GALTQTVPDI VKQLRAETLH
GAHLVFSGMV PLHRQQQQLE SGDKVVPRPT VIRYAETLGA KVWSKVTPVL THVVAAKDGT
DKILAARKLP GCRIVKPGWL MECVWSLTRR DEGRYLLGDA SPRFSELRTP LSEYSTAKEN
SSSELDDDSE DDDLAAQFES ELMEEEEYV
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