Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_42477 |
Symbol | |
ID | 7196046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | + |
Start bp | 174873 |
End bp | 176036 |
Gene Length | 1164 bp |
Protein Length | 332 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002176535 |
Protein GI | 219109561 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TCACGACGCC TTCCCTTCTT TTCCTTATTA TAATTCAACC GATTGATCCG TCGGCTCTAT GAATCAATGC TGTCGACTAC CGGGAGTGTT GTTACAACGC AGCTGGCGGT GGGTACTTGT TGCGGCGACG TTCGTCCTGT TTGTGGATCC TTTATCCGTC CAGGGATGGA TTCCCAACGT CCCAATGTTC CAACGAAGAG CGGCTTTCCC GAGAACAACA ATAACAACAA CATCATCACC AGCTGCTGCT GCGGCTTCCA TTATACGCGT ATCGCTGTCA CCGACTACCA CCACCGGTAG TCCCGACCCA TCCCAAGGAT CAACCTTGCC TCCACCATCA CCCTCGTTGG AAGCCTGGGA AACCTGGTGT GTGGAACGCA TGGCAACCTG GTACCACCAA GCTCTCTCCA TCAAGTGTCC CTTTTTCCGA CGTCGGGCTT CCGATGCTCT CGATACCATG GACGAAGTCT TGCGTTTTGT TATTGCACGA CACAAGTCTC TGGATGTCAC CTTTGTGTTG GGACCTCCGG CCGGTTGGCG TTGTGACGGA GACGTCCAAG ACAAGTGTTT ACGAATGGAA ACGGAGGACC TAATGACTGT CCTACAAGCG GATTGGCAGA CCGACACCAA CAAGGGATAC TATATAACGG GACGGTTAAA TACGGCAGTC TATCGGGACG ACTGTCTCTT TGACGGACCG GATCCAGATA TGCCTGTCCG CGGACTACGC AAGTACCTCA ACGCCGCCTC GCAACTCTTT GATCCGCGCA CGAGCCGGGC TACACTCCTA TCATTGGAGG AAGAGAAAGA AGATGGAGTG CTAGTGACGA ACGACGTCGA CAAACTTCCG ACCCGAATCG TAGCAAAGTG GGAAATGCGG GGTATTCTCC GGCTTCCCTG GAAGCCGTCG CTGCCAACCT GGACCGGAAC CACCACCTAC GTGCGAGATG CGGATGGTTT GATATACCAA CACTTGGAAA CATGGGACAT GTCGGTTGGG GAGGCCTTTC TCAGAACCTT AGCACCGGAC GTTGCGGCCC GTATATGGAA GGAGTGAGGT CCAATTTTAA TCGGAGTGCC AGTGGGCGAC ATGATTCGCC CGAGACTTGG CTGTGTAAAT CTAACGCTGT ACAACTATAC ATAAGAGCCT GTCATTTTGC GTTG
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Protein sequence | MNQCCRLPGV LLQRSWRWVL VAATFVLFVD PLSVQGWIPN VPMFQRRAAF PRTTITTTSS PAAAAASIIR VSLSPTTTTG SPDPSQGSTL PPPSPSLEAW ETWCVERMAT WYHQALSIKC PFFRRRASDA LDTMDEVLRF VIARHKSLDV TFVLGPPAGW RCDGDVQDKC LRMETEDLMT VLQADWQTDT NKGYYITGRL NTAVYRDDCL FDGPDPDMPV RGLRKYLNAA SQLFDPRTSR ATLLSLEEEK EDGVLVTNDV DKLPTRIVAK WEMRGILRLP WKPSLPTWTG TTTYVRDADG LIYQHLETWD MSVGEAFLRT LAPDVAARIW KE
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