Gene PHATRDRAFT_42477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_42477 
Symbol 
ID7196046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp174873 
End bp176036 
Gene Length1164 bp 
Protein Length332 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176535 
Protein GI219109561 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCACGACGCC TTCCCTTCTT TTCCTTATTA TAATTCAACC GATTGATCCG TCGGCTCTAT 
GAATCAATGC TGTCGACTAC CGGGAGTGTT GTTACAACGC AGCTGGCGGT GGGTACTTGT
TGCGGCGACG TTCGTCCTGT TTGTGGATCC TTTATCCGTC CAGGGATGGA TTCCCAACGT
CCCAATGTTC CAACGAAGAG CGGCTTTCCC GAGAACAACA ATAACAACAA CATCATCACC
AGCTGCTGCT GCGGCTTCCA TTATACGCGT ATCGCTGTCA CCGACTACCA CCACCGGTAG
TCCCGACCCA TCCCAAGGAT CAACCTTGCC TCCACCATCA CCCTCGTTGG AAGCCTGGGA
AACCTGGTGT GTGGAACGCA TGGCAACCTG GTACCACCAA GCTCTCTCCA TCAAGTGTCC
CTTTTTCCGA CGTCGGGCTT CCGATGCTCT CGATACCATG GACGAAGTCT TGCGTTTTGT
TATTGCACGA CACAAGTCTC TGGATGTCAC CTTTGTGTTG GGACCTCCGG CCGGTTGGCG
TTGTGACGGA GACGTCCAAG ACAAGTGTTT ACGAATGGAA ACGGAGGACC TAATGACTGT
CCTACAAGCG GATTGGCAGA CCGACACCAA CAAGGGATAC TATATAACGG GACGGTTAAA
TACGGCAGTC TATCGGGACG ACTGTCTCTT TGACGGACCG GATCCAGATA TGCCTGTCCG
CGGACTACGC AAGTACCTCA ACGCCGCCTC GCAACTCTTT GATCCGCGCA CGAGCCGGGC
TACACTCCTA TCATTGGAGG AAGAGAAAGA AGATGGAGTG CTAGTGACGA ACGACGTCGA
CAAACTTCCG ACCCGAATCG TAGCAAAGTG GGAAATGCGG GGTATTCTCC GGCTTCCCTG
GAAGCCGTCG CTGCCAACCT GGACCGGAAC CACCACCTAC GTGCGAGATG CGGATGGTTT
GATATACCAA CACTTGGAAA CATGGGACAT GTCGGTTGGG GAGGCCTTTC TCAGAACCTT
AGCACCGGAC GTTGCGGCCC GTATATGGAA GGAGTGAGGT CCAATTTTAA TCGGAGTGCC
AGTGGGCGAC ATGATTCGCC CGAGACTTGG CTGTGTAAAT CTAACGCTGT ACAACTATAC
ATAAGAGCCT GTCATTTTGC GTTG
 
Protein sequence
MNQCCRLPGV LLQRSWRWVL VAATFVLFVD PLSVQGWIPN VPMFQRRAAF PRTTITTTSS 
PAAAAASIIR VSLSPTTTTG SPDPSQGSTL PPPSPSLEAW ETWCVERMAT WYHQALSIKC
PFFRRRASDA LDTMDEVLRF VIARHKSLDV TFVLGPPAGW RCDGDVQDKC LRMETEDLMT
VLQADWQTDT NKGYYITGRL NTAVYRDDCL FDGPDPDMPV RGLRKYLNAA SQLFDPRTSR
ATLLSLEEEK EDGVLVTNDV DKLPTRIVAK WEMRGILRLP WKPSLPTWTG TTTYVRDADG
LIYQHLETWD MSVGEAFLRT LAPDVAARIW KE