| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42458 |
|---|
| Symbol | PSAT |
|---|
| ID | 7196661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | - |
|---|
| Start bp | 123068 |
|---|
| End bp | 124832 |
|---|
| Gene Length | 1765 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | phosphoserine transaminase |
|---|
| Protein accession | XP_002177021 |
|---|
| Protein GI | 219110539 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.809086 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CATGATGCGT TTTGCTCCTA CCGCCAATCT AGTCGCCTTT GTACGTTCGT CTCCCGCAGT
CCGAACTAGC AGAGCTACTG CCATTCGGTT CTTGAGTGCC GCTCCCAGCG TCAAGGTACG
TGTATAGCTT GCGTAGATCG AGCGCGAAGG CAGGCCTATC CTTCCGACAA CACACACGGG
ATCGCTCCTC TCGTTTTGTT TTATAGTCAA ATTTCTCTCA TCCGCGACTC TTTTCTGTAC
CCACCTCAGC CTGTCAATCC GGAGTTCTCC TCGGGTCCCT GCAAAAAGCG TCCGGGCTAC
GATGTTGCCA CTCTCGACAA ACAGACTTTG GGCCGTTCGC ACCGCTCCAA AATCGGCAAG
GAGCGTCTAG CGTTGGCCAT TGACGAAACC AAGCGTATCC TTGGTGTACC CGACGACTAT
CTCGTTGGTA TCGTCCCCGC CTCCGATACC GGAGCCTACG AAATGGCCAT GTGGAACATG
CTCGGCGCCC GCAATATCGA CATTTGCCAT TGGGAATCCT TCGGCAAGGG ATGGTTCGCC
GACGCCGTCA GTCATTTGAA ATTGCGCGAC ATCGTCGAAG TCACGGAACA CACGGCTGAT
TATGGCGAAC TCCCGGATCT CACCAAGACC AACCCCGCCA ACGACATTTG CTTCACCTTC
AACGGAACCA CCTCGGGAGT CCGCGTCCGG GACGGTTGCG ATTTCATCGC CGACGATCGC
ACGGGTCTGA CTTTGTGCGA CGCTACCTCC GCATGTTTCG CCATGGATAT GCCCTGGGAC
AAGCTCGACG TCACGACGTA TTCGTGGCAA AAGGTCTTGG GCGGTGAAGG TGCCCACGGG
GTCCTCATTC TCAGTCCCCG TGCGGTCAAA CGACTCGAGT CCTACACACC GGAAAACCGT
CCCTTGCCCA AGATTTTCCG GCTCGCCAAA AAGGGCAAGC TCGAAGCGGG TATTTTCAAA
GGTGCCACTA TCAACACCCC CAGTATGTTG GCCGTGGAAG ACTACATTGA CGCCCTGCAG
TGGGCCTCGT CCATCGGGGG TGTTGAAGGA TTGAAGAAAC TTAGTCTCGA CAATTTAGCC
GTCCTCGAAA AGTTCGTTGC CGAAAACGAA TGGATTGACT TTTTGGCCAA AGATCCTTCT
ATCCGTTCGT CAACTTCGGT ATGTTTGACA CTGGACCTGA CCCCGGAACA GATCAAGGCA
TTCGTCGCCA AACTGGAGAA GGAAGGCGTC GCCTTTGATA TTGGTGGTTA CCGCGACGCT
CCTCCCTCCA TTCGGATCTG GTGCGGATCG ACCATTGAAA AGGCGGATGT CGAAGCTCTC
ATGCCCTGGC TCAAGTGGGC CTACGAGGAA GTAAAGTCGG CATAGACGAA TCCTGTAGTA
GTGAAACCGT ATGCGTTGCA TCGACACGTT AATTGTTGGC CTTGAGACAT AGTGACTGTC
TTCTACCCTT TCCACGCAGA ACGTGCAGGC AAGTAGCAAA TGCATATAGC TTCTTGTCAA
TGTAGTGAGT CGAGAGCGAT GCTGTTCACG AAAGAGTGTT CCGGTCCATC TTTCAAGCCA
AAAAGCCAGT CGACGATCCT CTCATTCGGA GAGGCCACAC CATGTCAACC GACGCTGATC
CACGGTTATA TAGAGAACAT GAAAATGCGA AACAGCAGAT GCTACAATGA GGGCACATAT
CGATGAAGTT CTAGCAGTGG CATGCTTTTA TTAAAGTATA TTCGCAAATT GGTTGCTGAC
TCTCTTTTCG AAATGTTTAG ACAAG
|
|---|
| Protein sequence | MMRFAPTANL VAFVRSSPAV RTSRATAIRF LSAAPSVKPV NPEFSSGPCK KRPGYDVATL
DKQTLGRSHR SKIGKERLAL AIDETKRILG VPDDYLVGIV PASDTGAYEM AMWNMLGARN
IDICHWESFG KGWFADAVSH LKLRDIVEVT EHTADYGELP DLTKTNPAND ICFTFNGTTS
GVRVRDGCDF IADDRTGLTL CDATSACFAM DMPWDKLDVT TYSWQKVLGG EGAHGVLILS
PRAVKRLESY TPENRPLPKI FRLAKKGKLE AGIFKGATIN TPSMLAVEDY IDALQWASSI
GGVEGLKKLS LDNLAVLEKF VAENEWIDFL AKDPSIRSST SVCLTLDLTP EQIKAFVAKL
EKEGVAFDIG GYRDAPPSIR IWCGSTIEKA DVEALMPWLK WAYEEVKSA
|
|---|
| |