Gene PHATRDRAFT_42451 details

Gene Information

• Locus tag: PHATRDRAFT_42451
• ID: 7196655
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: +
• Start bp: 104724
• End bp: 106887
• Gene Length: 2164 bp
• Protein Length: 681 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002176523
• Protein GI: 219109537

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AACGAGTTGA CAGTTACAAG TGCGATGATC TACGAACGTT CGCTCACCAT GTCGCAACCA 
CAGAGCTGGG AGAGTATAAC CGGTTTTGCT GCTTCTTTAG TGAACACAGC CAATGAGCTT 
TTTAGCGGTG GAGATGAAGC AGAGGCCTTG CTTATGTTCG AGTCAGCGCA CCACGTTTTG 
CGTACGCCAT CCGCCGAGGT TCTGGCAGTT GCGGCTAAGC AGTATCAGCT TAGCACCGAT 
CGTCTGCACA ATAATGAATC TGATCGGTCA AAGGATGGTC CGATCTGCCC CGCTGATCTT 
TATCAAGAAG ATGAATGTGA CGTCGGCCCG CGACTTCTCC GCTCACCAAT TCGCTTGGAC 
GGGATTTATC CTTTGCATAG TGAAGCTGCT ATTGTCGAAA CTGCAATCGT CTTCAACAAA 
GCTTTGGCAC AGCAGATTGG AAACGATGAA AACAGCGCGA AGCAAAACTA TCAGCTTGTG 
CTAATGTCCC TACGATCATT CCTTTCCAGA CTGGCTCCAA GCTTGCCTCC GACACTCCTC 
CTAGAACTAG GTATGCGAGC ACACAACAAT ATGGGATTAC TCAGTTACGC CAAGGGAGAT 
GAAGATGCTG CTACTTCTCT TTTTCAAGCA GCATTGGTTT TTGCCAAGCA ACTCTCGGAA 
ATTTCGAAGG CCTACAGTCT CGAATATGTA ACCGTCCTTT CTAACTGGTG CCGCGTAAGC 
TGGATGAGGG GTGACATAAA TGACAATTTG TACAAGGGGT TGCGCGAAGT TCTCCGACTT 
CGTTCCGCAA ATCTTTGTTG GGATCATCCA GATGTGGCGG CAGCCCATTA CAACTTGGCT 
GTGGCTGAAT ACGCTAGGCA GCGGGAGGAA GAAGCAACTT TACATTTGCG CCAGTATCTA 
CACGTTGCCT CGCACCGATC CGAAACCGGA CAACACGATG TCGACCCTAT TCCTGCTCTG 
ATTCACTTGC TTTTGCTGCA GAACGAAGAG AAGGACGACA GCATATCACA AGACTTGGTT 
CGGGGATTGC GCACACTCCA GGACAAACGT CAAGATCAGG GACCGCGTAG CTCCGATGTA 
GCCTCGGTAC TAAACTTTAT TGGCACGCTG CTTTTTCACA AGCAAGATTT TGAGAACGCA 
CTACTATTCT TTGAAGAAGA GCTGCGATTG GAAGAAACAA TGCAAGAATG CACGGACGAC 
ATTTCGGTTG CGGTAACCTG CAATAACATT GGCCGCATCT TACAAGAGCT CGGTCGCCAC 
CCGGAAGCGG TACACTTTTA CAAGCGCGCT CTCGAAAACC GAATACGGAG ATGTGAGTAC 
GACATGGGAA GGCAAGGAAG CAAGAGCATG CCGTTTCAAA ATGCCCTTGG AAGCAAAACC 
CTCTTCCGTG AATCTGTACT CGACAGTGTG GTACAACCTT GGGCTGATCC ATGATCGACT 
CGGGGCCTAC ATTGACGCCA TTTCCTCCTT TCAAATGTCT TTGGAATTGC GTAAGACGAT 
GCTCGGACGT GACCACCCCG ATATTGCCTG CCTACTGTAC AATATTGGAG TCCTGCAAAT 
GGAACAGCAA CAGCTATCTG AAGCGTCGTT TTCCTTCAGA GAGGCGCTGC GTATCCGATG 
CGTAGGCACC ACGGGTCAGC TCAACGATCG ACACGTAATA AAGACGCTGG AAAAGCTCTC 
GTCTTTACAA AGAGCCAAAG GAAATATTAA CGGTGCTCTG GAAGCGTCTC GTGAAGTCTT 
ACGTATTCAG GAAGTTACGG CCGAGTACGA TCATGTAACC CGGCTGAAGG ACACAGGTGT 
GACGCTGCGA TCAATTGCGG AACTCCAGCA CGCAATTGGG AATCTTGACT GTGCCCTTGA 
GGCTTCGATG GAAAGCGCTC GCAAACTCGA AGCAGCCAAC AGCGCTCGGT ATAGCCAAGA 
TGAGACCATG AACAGCAAAA GTGTTTCCGA TTCGTTTGTC TACACGGAAC ACCAGGTCTC 
ATCTTTACTT TTGGTCGGGA GTCTACACCA TGAACTGGGC GAGCCGATGC ACGCACTTCG 
TGTCTTTGAG GAGGCCTTAC TGCTGATGGA AGAAGCCGAC GCTAGGCGAC TCGTGCCTTC 
GAGCCACGCG TTGCGTGAAG TTACTTGCAT GTTAGCTCGC TCCCACTGTG CCCCGGTTGC 
GTAA 

 

Protein sequence

MIYERSLTMS QPQSWESITG FAASLVNTAN ELFSGGDEAE ALLMFESAHH VLRTPSAEVL 
AVAAKQYQLS TDRLHNNESD RSKDGPICPA DLYQEDECDV GPRLLRSPIR LDGIYPLHSE 
AAIVETAIVF NKALAQQIGN DENSAKQNYQ LVLMSLRSFL SRLAPSLPPT LLLELGMRAH 
NNMGLLSYAK GDEDAATSLF QAALVFAKQL SEISKAYSLE YVTVLSNWCR VSWMRGDIND 
NLYKGLREVL RLRSANLCWD HPDVAAAHYN LAVAEYARQR EEEATLHLRQ YLHVASHRSE 
TGQHDVDPIP ALIHLLLLQN EEKDDSISQD LVRGLRTLQD KRQDQGPRSS DVASVLNFIG 
TLLFHKQDFE NALLFFEEEL RLEETMQECT DDISVAVTCN NIGRILQELG RHPEAVHFYK 
RALENRIRRL WYNLGLIHDR LGAYIDAISS FQMSLELRKT MLGRDHPDIA CLLYNIGVLQ 
MEQQQLSEAS FSFREALRIR CVGTTGQLND RHVIKTLEKL SSLQRAKGNI NGALEASREV 
LRIQEVTAEY DHVTRLKDTG VTLRSIAELQ HAIGNLDCAL EASMESARKL EAANSARYSQ 
DETMNSKSVS DSFVYTEHQV SSLLLVGSLH HELGEPMHAL RVFEEALLLM EEADARRLVP 
SSHALREVTC MLARSHCAPV A