| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42440 |
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| Symbol | |
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| ID | 7196644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 58601 |
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| End bp | 60029 |
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| Gene Length | 1429 bp |
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| Protein Length | 475 aa |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177009 |
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| Protein GI | 219110515 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.727315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CATGGCAGAA AGACGACCGC ATCCTCCTTC TCTTTCGGTA GCTATTTTAC AAATTCTGAT
TCTTTATCAC ATGCTGCAGC GAGCCGCGGC GTTGGCAACG TCGCGAATTT CTTCTCCATA
CACAAAACGC GGTCTGGTTC GAGTGGTCGC ATTTTCGGTT TCCAACCCCA ACGAAGAACA
GGTGCAGGAC ATGCTATCCA ACGTTCTGTC ACGAGCCACA CGCACGTTGT CCTCGAAATC
CTATACCAAT TTCTCTGTAA ATAGCACCTG CTCTTCCGAG CCGTGGCGGA ATGAATCGCG
TGTCGACGAT GATTCCGTAT TGGATATGCT GGAGGCAATT CGAGTGGGCA CCGCGAATGG
GAACTCGTCA ATGGTTCGCA CCGATGCGAC AAGGAGCACC AACAGTGCTG TATCCTCTTC
TTTCTCTCCG TCGGTAACAT CCGCTATTAG ATTGGATTCC CTTTTCACGA ATTCCATATC
GCGAGCCAAA CGCACATTCA CCACCAAAGT GGAATTCCAG GAAGCATCCA AATCGAACAA
ATTGGTCGAC GATACGGTCA CAACCATACT CGACAAGGTA CAGCAGCAAG GTCGCGTCCC
ATCGCCGACA CCCGCTCCAG ATCCCTTGCC TCGTCCCACG GACACTGATT TGCACTACCA
GCAAAATCCC GCCATTTCAG CCACTGCCCT GGCCCATTCC TTGTGGGGTT ACGTGCTCCG
ACCGGGCCTG GATTCGGCCA TTGACGCAAC GGCAGGAAAC GGTGGGGATG CCGCTACAAT
TGCCACGATG CTCTTTTCAA ACGTGACCCA AAGCTCGACG TCATTAATGC CAACCTCGCG
ATCCGAACTC GTTTGTGTCG ATGTGCAGAC CCAAGCGTGT GCGAATACGC GCAGCGCGTT
GGAAGACTGC GTCGGCTCGG ACGTAGTGGA GCAACGCGTT CGGATAATCC AAGCATCTCA
CGCACCATTG CCACTACCCA CTGATACCTC CTCAATCGCC CTGGTAGTCT TTAATCTCGG
GTTCTTACCC CAATCGGAAA ATAAAGCCCG TCAAACCCAG ACCGACACAA CCTTGGCTGC
CATGGCCGAC GCCTGTACGG TCTTACGCAT TGGCGGCCTG CTATCCGTCA TGACCTACCC
AGCGTCCAAC GCTCACGAAG ATGCGCTGGC CCGGGCCTTT ATGGAATCTT TGGCGCTATA
CAGCTCCAAA ACAGAAAATT GGGAAACCTT TGTGGACGAA TTGATGTTTC CAGCCGAGAA
TGATGACACT GCAACAGCCG ACGCCGAAGA TTGGAACGAA CAGCTCCGAC GGTCACTACG
GTATGTTTAC GAAGAAAATG GACCCACACA GACCTGGCGG GTTCACGAAC ACCGGAAAAT
TGGATGGAAG AACGCGCCCG TCTTGCTCAC CGCAATCCGA ATCAAGTAG
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| Protein sequence | MAERRPHPPS LSVAILQILI LYHMLQRAAA LATSRISSPY TKRGLVRVVA FSVSNPNEEQ
VQDMLSNVLS RATRTLSSKS YTNFSVNSTC SSEPWRNESR VDDDSVLDML EAIRVGTANG
NSSMVRTDAT RSTNSAVSSS FSPSVTSAIR LDSLFTNSIS RAKRTFTTKV EFQEASKSNK
LVDDTVTTIL DKVQQQGRVP SPTPAPDPLP RPTDTDLHYQ QNPAISATAL AHSLWGYVLR
PGLDSAIDAT AGNGGDAATI ATMLFSNVTQ SSTSLMPTSR SELVCVDVQT QACANTRSAL
EDCVGSDVVE QRVRIIQASH APLPLPTDTS SIALVVFNLG FLPQSENKAR QTQTDTTLAA
MADACTVLRI GGLLSVMTYP ASNAHEDALA RAFMESLALY SSKTENWETF VDELMFPAEN
DDTATADAED WNEQLRRSLR YVYEENGPTQ TWRVHEHRKI GWKNAPVLLT AIRIK
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