| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42437 |
|---|
| Symbol | |
|---|
| ID | 7196642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | - |
|---|
| Start bp | 49681 |
|---|
| End bp | 51216 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177006 |
|---|
| Protein GI | 219110509 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.138953 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGGTC TTGTTCCCAA ACCTTCCGCC AAAGATAGAC ATTGCAAAGG GTTCCAGTGT
GCCGCTCTTC TTCTTTACAC TTTGCGCACT TGTAGGATCG GCCAATTTGT ACCTACGCGA
AACATGGATG ACACTACGAT GCATCGAGCG GCCAGCCAGG ATTCGACAGA CATACGCTCT
CCGCGGTTAA AGGAAACGTT TCCCTCAGTC GCCAACGAGG GAAGCCCTTC ACTAGCCGAA
CATGCATCAA CCACTAAGCC GCTGACATTT CCTAAACCAA CCCATAGTCG CGCGGATAAT
TGGATGATTG TCTCGTACCG ACGGACACGA TTCAGCAAGT TTTGCAAGGT TGATGTGCAT
CCCGAAGACT ATTCCAAGCG CAATAATTTG CCCAGGTGTC GCCCAAGTCT CGTTGACCCC
TTACCAAGTA CTCCGCTTTC GGATTGCGAT ACGTGTGATG CTGACAGCAA TTTGCATCGA
CAGAAGGACT CTTTACCGGA CCGCGTCGAT GTGATCGTAG AGGTAAGAAG CCTCTCGCCC
ATGCGTCGTG TTGGACTTTG TTCAAGAAGT CCATTCTCAT GCCAGATATA AATTCTTTGG
GTTTTAATTC ATCCTAGGCG ACTGCACTTT GTGATCAAGA TTTGCATATA CGGCGCAATG
CTTCCGAAAT ACATAAATGG TGGCCCTGCG CGTTCGGTAG CAGCTTTGTC GGACGCGCCC
AGGCCTGCGG CCCCGAAGCG AAAGAAGCCG GGATCAAACC AGGATCGCGC GTGGCTGTAA
TAGCCAAAAG TGGACCTATT GCCCGCTACG TTCCCGCTCG CGCACAGGAT TTAGTGACTG
TACCGAAAGA ATTGGATGCT GCCGACATTG CCTGCCTAAT TGCTACATAC TTACCAGCCT
TCCAAGCTTT GCATCACGGA AGGATCCGCC CCTACCGGTA TTCTCGAACA TGTTTCAAAG
GAAGGAGGAT TTTGGTCACT GGTGGAGCTT CACCGGAAGG ACTGGCAGTC GTTCGATTGG
CTCAATTGGC GGGAGCCAAG GACATTTTTG TAACGGCCCC GAGAGCGCAC TTTGATGTTA
TCAAAGCGCA GCGTGCAATA CCGGTCGACG ACAATGCAGA GGCATGGTTG GATCAGCTCG
AAGGGCGTAT CGACATTGCC ATCGATTTGA ATTTTCCAAG AAATTTTGTC TTTGTACGTC
AGTCTTTGGC ACGGAAGGGG AGATTGGTAT GTCGCCCAAT ACATCATTGT AGCAGCGCTC
CTGAGCAACA CTGCATGACA ATGACTAAAA ATCTATTTGG TCGCTTCCGT TTGTGTATGA
TGAAACGTGC AACAATCTTT GATTTTACGG AAAACCTGGA ATTGCATCGG AATGAAACAG
GAACAGGACT TTGGGTTTCT CCTACGTATG CTAGCGCTTC GAAAGATTCG CCCACACATT
GATTGCTTCA TCCGACTGGG TGATGTCCCT GAAACCCTCC TAGACCTACG TGCCAAGCTA
TCAACTGGCA CCATCATTTG TGAACCTTGG AAATAG
|
|---|
| Protein sequence | MMGLVPKPSA KDRHCKGFQC AALLLYTLRT CRIGQFVPTR NMDDTTMHRA ASQDSTDIRS
PRLKETFPSV ANEGSPSLAE HASTTKPLTF PKPTHSRADN WMIVSYRRTR FSKFCKVDVH
PEDYSKRNNL PRCRPSLVDP LPSTPLSDCD TCDADSNLHR QKDSLPDRVD VIVEATALCD
QDLHIRRNAS EIHKWWPCAF GSSFVGRAQA CGPEAKEAGI KPGSRVAVIA KSGPIARYVP
ARAQDLVTVP KELDAADIAC LIATYLPAFQ ALHHGRIRPY RYSRTCFKGR RILVTGGASP
EGLAVVRLAQ LAGAKDIFVT APRAHFDVIK AQRAIPVDDN AEAWLDQLEG RIDIAIDLNF
PRNFVFVRQS LARKGRLEQD FGFLLRMLAL RKIRPHIDCF IRLGDVPETL LDLRAKLSTG
TIICEPWK
|
|---|
| |