| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42434 |
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| Symbol | |
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| ID | 7196621 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 41016 |
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| End bp | 42852 |
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| Gene Length | 1837 bp |
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| Protein Length | 484 aa |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002176508 |
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| Protein GI | 219109507 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTCGT CCATGAGCAT GAACGAAACG GGAGCGTCTC CTTCTTCGGG AGGTGCTGTA
CCTACCACCG GTGACTTTGT GGATCTCCAC GAACTCTCGA AAGGATGGAA AGCAGCAATT
ACCAGAGCCA AGGACCCTTC TACAAGGTAC GCCGTTCCCT TCCGCCTTGT GCAGATCATT
CCTCGAACCG ACAGTCGCGC ACTTGTGTAT ACACACTCAC ACTCGTATAC ACATACTCGT
TGATACACAT TCTCACACAC ACACACTCAC ACCCACATAC ATACATACAT ACGTAGGTAC
GAAGCGCGCG TCAAGAATGA TCGCGGAAAC TTGCCGTTGC ATTCGGCAGC GTCGTTCCGT
GCTCCACTGG AAGTAGCCGA AGCACTCCTC GCGGCCTACC CGGAAGCGGC CTCCATCACC
AACAACTACG GAAACCTGGC ACTGCACTTT ACGGCCTGGA AGAAAGGTCC TCTGGATGTG
GAACAGCTAC TCCTCAAAGT GTTCCCCCAA GGGGCGGCGC AAAAGAACAA CCACGGCAAN
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNT CCATGGAACA
GCGAGATGGC ATGACCGAAG AACGCGAAAT GGTGCTCGCC ATGTTGATGG ATATGAAGGA
AAATCATCCG CACGCCTTAT ACTCGGCGGG CATTGATCCC AAGGCCGTCA CCGACTTGGA
CTCCATGCTG GAACAGGTGC GCAAAGCTTC GGTTGAAGAA ACAATTCCTC CCGGGAGCAG
TGACGAGGAA ATCGATGCAC AGCTTATTGA AGAATCACTA TGTCCTCCGG ATGATCCGGT
CGAAGTGGCG TTGGCCGGTG TGATTGGATG TAGCGCGGTC AAAAACCAAA TCCGCGGACT
GCGACGTACC ATTGAAATAG CCGCAGCTAC TGGTGAAGTC TCCAAAATCC CGCGTCACTT
GGCCTTTATC GGAAACCCAG GAACCGGCAA GACCATGGTG GCCCGCAAAA TGGTCAACAT
CCTGCGTAAC GTGGGAGCCA TACAGAGCCT CAACTTTGTC GAAGTGGGCC GTGAAGATCT
CATTGACAAG AAGAGTGAAG CCCGGACCGT CTTCAAGACA CGAAAAGTAT TGGAACGTGC
CGCCGGAGGG GTCTTGTTTG TCGACGAAGC GTACACTTTG TTGCCCTCAA CGGCCCGTCC
GCGTGGACGC GATCACGGAG CGGCAGCTTT GCGGGAGATT GCCCGAGCAC TCCCCGGCGG
AAACCCACTG GTCATTCTGA CCGGTGCACC CTTGGATCTG CAGCGTGTAC TCTCTAGCGA
CATTGGTTTC AAGGGACACT TTTTGACCAG AATCGAGTTT CCGGATGCGA CCCCTCTACA
GATTGCACAC ATGTTCATGG CAAAACTGTC CGAGAAGGGA CTCATGCCGG CCCAAGGTGT
CACCCCACAG TACCTGGGTG AGCTGATCAA GTCGAATACG GAAGCCGAAT GGAGGCAGGA
GCGAAACGGT CGTATTGCCG ACCTGTTACT GCTGGGCGTC CGGGCCGAAG TCAAGAAACG
TGCCGTCTGG GACGATACCG CGTCCAAGGG ATCGTTGAGC CCCATGAAAA TTCTTAGCCC
GGGATCTTCT CGCATGCCTG CTTTTGCCCC CGAAGAAGTA TTTGTGAATG TGGAAGATAT
TCAGAATGCC ATTGTGAACG GCATGTAAAC GTTCAAATGC TAACCCGATC CTTGTGTTGT
GATTGAGCCG TCGGGCGTCG AGCTTAGACG TGAACGGTAC GATCCGGGTT GCAGACGTCG
TCTAGTTTAA CTACTACATA GCGAGCCGTT GCCGAAT
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| Protein sequence | MASSMSMNET GASPSSGGAV PTTGDFVDLH ELSKGWKAAI TRAKDPSTRY EARVKNDRGN
LPLHSAASFR APLEVAEALL AAYPEAASIT NNYGNLALHF TAWKKGPLDV EQLLLKRDGM
TEEREMVLAM LMDMKENHPH ALYSAGIDPK AVTDLDSMLE QVRKASVEET IPPGSSDEEI
DAQLIEESLC PPDDPVEVAL AGVIGCSAVK NQIRGLRRTI EIAAATGEVS KIPRHLAFIG
NPGTGKTMVA RKMVNILRNV GAIQSLNFVE VGREDLIDKK SEARTVFKTR KVLERAAGGV
LFVDEAYTLL PSTARPRGRD HGAAALREIA RALPGGNPLV ILTGAPLDLQ RVLSSDIGFK
GHFLTRIEFP DATPLQIAHM FMAKLSEKGL MPAQGVTPQY LGELIKSNTE AEWRQERNGR
IADLLLLGVR AEVKKRAVWD DTASKGSLSP MKILSPGSSR MPAFAPEEVF VNVEDIQNAI
VNGM
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