Gene PHATRDRAFT_3527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_3527 
Symbol 
ID7196368 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp936690 
End bp937556 
Gene Length867 bp 
Protein Length233 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176688 
Protein GI219109870 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTGAGGC CTCCTATTGA AACTGGGCCT CCACGAGCGT TAATTCATTT CTTAGGAGGT 
GCGATCGTGG GAAAGGCCCC TCACATAAGC TACCGATATT TGCTGGAAAG TTTGGCCAAG
AAAGGTTACA TGGTGGTTGC AACACCATAC GATCTATCAT TCGATTATTT AACAACGTGT
GATACAATAT TGTCACGGTT CGAAATGGTA GCCGCCACGC TGGCCCGACA ATACGGCGCA
TTACCGGTCG TTGGACTTGG ACACTCGTGT GGAAGCGTCT TGCAACTTCT CATTACGAGT
CTCTTTCCTG ATACGCCGAG GGGTGCAAAC GCACTTATCT CATTCAACAA TAAACCCGTA
ACCGAAGCAA TCCCGGTATT TGAGGAGGTT GTTGCACCGT TTTTTACCTA TGTTGCAGCT
CGAAACGCGA CACGGTCCAG TGGAAGCGAA ATATTATCCG TTGGTCTTCA GCTCGCCAAG
TCAGCCACTG TTGGGGAGGT TCCGTCAGAT CATTTGCTGA GCCGAGCAGC TCAACTTTTG
GCACCACCAG GTTTCGAAGC ATTTGCAAAA GATGCTACTG TCAGCGTACC ATTGGCCCTC
CGTGATGCCT TTGAATCTTT GGTGCAACCG TCAACCAACG CTTTGTCACA GGCAGGCTTG
GTACCTCTAA GCTACGAGTT TCTGGAGACG TTGGAACAGA TTCCACTCCT GATCGACGAG
GTGGCGGATG GAGCTCGTGA TTTTGTTCCT CCGCCTGCCG AAGTAAAAGC GGCTGCACGT
CGAGCATATC GCGCTCGACG GACACTAATT GTCAAGTACA CGGAAGATCC GTTGGATGAA
TCGGATGAAA TCGAGGACCT ACTACAG
 
Protein sequence
LLRPPIETGP PRALIHFLGG AIVGKAPHIS YRYLLESLAK KGYMVVATPY DLSFDYLTTC 
DTILSRFEMV AATLARQYGA LPVVGLGHSC GSVLQLLITS LFPDTPRGAN ALISFNNKPV
TEAIPVFEEV VAPFFTYVAA RNATRSSGSE ILSVGLQLAK SATVGEVPYE FLETLEQIPL
LIDEVADGAR DFVPPPAEVK AAARRAYRAR RTLIVKYTED PLDESDEIED LLQ