Gene PHATRDRAFT_3281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_3281 
Symbol 
ID7196567 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp2288303 
End bp2289745 
Gene Length1443 bp 
Protein Length354 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177489 
Protein GI219111475 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCATCG ACAATGGTGG AGACACGTTG AAGTACGGTT GGTCGACGGA CACATTGCCG 
TCCTTGATTC CCAACAAAAC GGCGCGCCTA CCGCAACAGT GGACTGTTCT AGTCGGTGAT
CAGTTATCCA CCGTTCAGAA TCCCAGTCAG CTCATTGGTG TCACTCACTC GACCGAACGC
GGTGTCGTTG TTAATCTCGG CAATCAGGTG CAAGTCTGGA AGCGTCTCTT GGATCTTTTG
CACGTATCGG TACCAACGCA TACCGAAACA GCTCAGGCGT TTGGTTGGAA AATCGCCGCC
CGAGCCAGAG CCGCCGATCC GGACACTCCC GAGATTCCCG CCGCAACGTG TGCAGTCCTG
CTAGCTTTGG CCCCGCACAC GCCTCGGATC ATGCTGGATC TCATCGTACA GACTTGGCTG
GAAGACCTGG GCTTCGCGCA CGTCGGACTC TGCGTATCCG CCGTCGCCGC GGCTCAGAAT
GTCTCCAACG ATTACGATAC CTGCTGCGTC GTTGATCTCG GCTGGAGCGC CACACACATT
GTTCCGACTC ACCGACAACA GGTACTGGAC TCACGAGCCA TCCGGCGAGT CCCAATTGGC
GGTCGGCATC TGATCAATGC TTGGAAACAC TTTTGCTCCT ATCGACAATG GAACTTGATG
GAGCAGGAAT TCATTGTACG CGATGTTTGG GAGCGGACGG CCTACGTCTC CCTCGATTTT
CATACCGAAA TAGCTTTGGC ACGACGTCTC CCTGCCGGGC AGCGACCCTA CGATCGAGAG
TTTGTTTTAC CGGATTTCCA AAAAACCACA CAAGGACGAG TCCAGTTGCC CGCCGCCTTG
CAGCTACAAC AACCAGAACA AGAAGTAGAA CAAATCAAAA CGCTGGCGGC CAAGGATGAA
TTTTTCGATG ACGAAAGTGT CGGCAAGGAT GAAATATTTG GCCAAACCAA CAACGAAGAC
GACAGCGGCG ACAACGACGA TGCGGAAGAT TCTGAGGATG AGAGTCCCGA AGATAGACGA
CAGCGCTTAC TACGCCAACG GAAAGAGGAA GAACGACAAC GAAGAGATCA GGAAGAGGAA
GAACAAATTT TGAACGTAAG TGTGGAACGC TTTACCTTCC CCGAAGCCTT CTTTCGTCCC
TCCGATTTGG GACTGCCACT TGACTGGGCC AGTCTTCCGC AGGCGATTGT GCAATCCATT
GGAGCGTGTC CAGAATCCTA CCAGCCAGCT CTGTATAAGA CGATTCGTCT GATTGGTGGT
CTTGCGCTGC TTTCAAACAT AAAGGCCAGG TTACTCCATG AAATTCGCTG CCTGGCTCCC
GCTGAATACG ATATTCAGCT GGACCTTGAC GATAAACCCG TGGCAGAGGC ATGGCAGGGC
GCGCGGAAGT ACGCGGCTAC GGTTAGGTAT AGGATTTGGA GCATCAGCAG AGACGAATGG
GAA
 
Protein sequence
LIIDNGGDTL KYGWSTDTLP SLIPNKTARL PQQWTVLVGD QLSTVQNPSQ LIGVTHSTER 
GVVVNLGNQV QVWKPADPDT PEIPAATCAV LLALAPHTPR IMLDLIVQTW LEDLGFAHVG
LCVSAVAAAQ NVSNDYDTCC VVDLGWSATH IVPTHRQQVL DSRAIRRVPI GGRHLINAWK
HFCSYRQWNL MEQEFIVRDV WERTAYVSLD FHTEIALARR LPAGQRPYDR EFEEQILNVS
VERFTFPEAF FRPSDLGLPL DWASLPQAIV QSIGACPESY QPALYKTIRL IGGLALLSNI
KARLLHEIRC LAPAEYDIQL DLDDKPVAEA WQGARKYAAT VRYRIWSISR DEWE