Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_3281 |
Symbol | |
ID | 7196567 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 2288303 |
End bp | 2289745 |
Gene Length | 1443 bp |
Protein Length | 354 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177489 |
Protein GI | 219111475 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATCATCG ACAATGGTGG AGACACGTTG AAGTACGGTT GGTCGACGGA CACATTGCCG TCCTTGATTC CCAACAAAAC GGCGCGCCTA CCGCAACAGT GGACTGTTCT AGTCGGTGAT CAGTTATCCA CCGTTCAGAA TCCCAGTCAG CTCATTGGTG TCACTCACTC GACCGAACGC GGTGTCGTTG TTAATCTCGG CAATCAGGTG CAAGTCTGGA AGCGTCTCTT GGATCTTTTG CACGTATCGG TACCAACGCA TACCGAAACA GCTCAGGCGT TTGGTTGGAA AATCGCCGCC CGAGCCAGAG CCGCCGATCC GGACACTCCC GAGATTCCCG CCGCAACGTG TGCAGTCCTG CTAGCTTTGG CCCCGCACAC GCCTCGGATC ATGCTGGATC TCATCGTACA GACTTGGCTG GAAGACCTGG GCTTCGCGCA CGTCGGACTC TGCGTATCCG CCGTCGCCGC GGCTCAGAAT GTCTCCAACG ATTACGATAC CTGCTGCGTC GTTGATCTCG GCTGGAGCGC CACACACATT GTTCCGACTC ACCGACAACA GGTACTGGAC TCACGAGCCA TCCGGCGAGT CCCAATTGGC GGTCGGCATC TGATCAATGC TTGGAAACAC TTTTGCTCCT ATCGACAATG GAACTTGATG GAGCAGGAAT TCATTGTACG CGATGTTTGG GAGCGGACGG CCTACGTCTC CCTCGATTTT CATACCGAAA TAGCTTTGGC ACGACGTCTC CCTGCCGGGC AGCGACCCTA CGATCGAGAG TTTGTTTTAC CGGATTTCCA AAAAACCACA CAAGGACGAG TCCAGTTGCC CGCCGCCTTG CAGCTACAAC AACCAGAACA AGAAGTAGAA CAAATCAAAA CGCTGGCGGC CAAGGATGAA TTTTTCGATG ACGAAAGTGT CGGCAAGGAT GAAATATTTG GCCAAACCAA CAACGAAGAC GACAGCGGCG ACAACGACGA TGCGGAAGAT TCTGAGGATG AGAGTCCCGA AGATAGACGA CAGCGCTTAC TACGCCAACG GAAAGAGGAA GAACGACAAC GAAGAGATCA GGAAGAGGAA GAACAAATTT TGAACGTAAG TGTGGAACGC TTTACCTTCC CCGAAGCCTT CTTTCGTCCC TCCGATTTGG GACTGCCACT TGACTGGGCC AGTCTTCCGC AGGCGATTGT GCAATCCATT GGAGCGTGTC CAGAATCCTA CCAGCCAGCT CTGTATAAGA CGATTCGTCT GATTGGTGGT CTTGCGCTGC TTTCAAACAT AAAGGCCAGG TTACTCCATG AAATTCGCTG CCTGGCTCCC GCTGAATACG ATATTCAGCT GGACCTTGAC GATAAACCCG TGGCAGAGGC ATGGCAGGGC GCGCGGAAGT ACGCGGCTAC GGTTAGGTAT AGGATTTGGA GCATCAGCAG AGACGAATGG GAA
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Protein sequence | LIIDNGGDTL KYGWSTDTLP SLIPNKTARL PQQWTVLVGD QLSTVQNPSQ LIGVTHSTER GVVVNLGNQV QVWKPADPDT PEIPAATCAV LLALAPHTPR IMLDLIVQTW LEDLGFAHVG LCVSAVAAAQ NVSNDYDTCC VVDLGWSATH IVPTHRQQVL DSRAIRRVPI GGRHLINAWK HFCSYRQWNL MEQEFIVRDV WERTAYVSLD FHTEIALARR LPAGQRPYDR EFEEQILNVS VERFTFPEAF FRPSDLGLPL DWASLPQAIV QSIGACPESY QPALYKTIRL IGGLALLSNI KARLLHEIRC LAPAEYDIQL DLDDKPVAEA WQGARKYAAT VRYRIWSISR DEWE
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