| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_32454 |
|---|
| Symbol | |
|---|
| ID | 7196610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | + |
|---|
| Start bp | 2511208 |
|---|
| End bp | 2512316 |
|---|
| Gene Length | 1109 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002176993 |
|---|
| Protein GI | 219110483 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAAG GGGATTCCCG CCGAAAGATT GGTGCTCAGG TGACAGCGAA GGCCTGTCAT
GTTGTCCATT TGAGTGAGTG TGCTCGGCGA CACGGTGCTT TGAGGACCAC CAAGGTCGTT
GTGGGGACTG TTGTGGAGGT CAACAATACC AGAAAGGCGC CAAACAACCG TGTATCAACC
TTCATTACTG CTGACTTTGA TATTGGTGGA GGATCAGTCA AGCGGAGCAC TCTGAACATC
CGTAGCGTCA AACTTTTCAA ACCGGACCAG TCGACAGTAC CATCCAGTCC CGCAGCACCA
ATACCGGCAG TAGACAAGCA GACACAGATT TGGCCGTTCC AGAGCAAGAG GAAGGAGAAG
CGGTCTTGCA GGAGACTTCT CCTGATGAAG AATTGGAATT TCCAGCACAA CCGATGATGG
AAATTGGAAT AGCTGCGGGG GAACAGGTAG CAGGACCTAC CGCACAAGTA GCCACGCAGG
TTTGGGGTGT TGAAGACGCT TCCTTTGTAA TGGCTCATGA AACAAAGTGG TATGCTGACG
AGCAAGCTAC ATTGATTGAT ATAAATGGCA GTGTCCAAAG TAAGCAGTTT GGCATCAATA
CACCAATTGG CGACCTTCTT GGTCCAGACT CTGACATTGA TGGAAAATAT TCGCGGCTGC
AATATTTTCT TCTCATGTTT CCACCCGACC AACTGAGCGC CATGTGTCAG CAAACAAATG
TGCAGCTTGC CCAACAGAAC AAGCACTACA TGTCAACAGG AGAGCTGCTT CGATTCTTTG
GCATTCTAAT TCTTGCGACA AAATTTGAAT TTAGCAGTCG ATCGCAATTG TGGTCCACAA
CCGCGCCGTC AAAATACATT CCTGCCCCTG CATTCGGAAA AACAGGAATG TCGCGGCAGC
GCTTTGATGA TCTTTGGCGA AATATCCGAT GGAGCAACCA GTGTCCTGAA CGGCCGGAAG
GCATGAGCTC CCATACGTTT CGGTGGCAAC TTGTCGATGA TTTTGTTGAA AGATACAACA
ATCATCGAGC CAATACTTTC AAACCATCTC ATCTTATTTG TGTGGACAAA TCAATGTCGC
GATGGTATGG ACAAGGGGGG AATGGATAA
|
|---|
| Protein sequence | MSEGDSRRKI GAQVTAKACH VVHLSECARR HGALRTTKVV VGTVVEVNNT RKAPNNRVST
FITADFDIGG GSRQTFQTGP VDSTIQSRST NTGSRQADTD LAVPEQEEGE AVLQETSPDE
ELEFPAQPMM EIGIAAGEQV AGPTAQVATQ VWGVEDASFV MAHETKWYAD EQATLIDING
SVQSKQFGIN TPIGDLLGPD SDIDGKYSRL QYFLLMFPPD QLSAMCQQTN VQLAQQNKHY
MSTGELLRFF GILILATKFE FSSRSQLWST TAPSKYIPAP AFGKTGMSRQ RFDDLWRNIR
WSNQCPERPE GMSSHTFRWQ LVDDFVERYN NHRANTFKPS HLICVDKSMS RWYGQGGNG
|
|---|
| |