Gene PHATRDRAFT_32453 details

Gene Information

• Locus tag: PHATRDRAFT_32453
• ID: 7196983
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: +
• Start bp: 2507457
• End bp: 2510862
• Gene Length: 3406 bp
• Protein Length: 1120 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002176992
• Protein GI: 219110481

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTCCCG CCACCCGGCA AATGACGAGT GCAGCCGTCT ATGCCCACCT TTTGGACAAC 
GTACTTCTTC CCCAAGGGCA TCCTATCCGT CTCAGTTTTG AGCAGCAAGG ATATGAATCG 
GCTGATGATC TCCTGTGTAT TTTTGAGAAT GAACTTGAGT CTCTTGGATA CACTCCTTCT 
GTCCTTCCCG ACGGCCCGGA AAACCCGCCT ACCATTCCCC TTCTCATGGC GCACCGACAG 
ATCATACGTC ATTTCTTGCG CTGGCAGGCA TCTTTGGAAC AACAAAAGGG GACACCTTTG 
AAGAACTCCG AGCTTGTTGC ACTTAACAAT GAAGATTTTG TCATTTACCG TCGCTCAGCC 
CTTGGTCAAG TCTCGACAGC AACTGCACCG GTTAATGCTT CCCCAACTGT TCAGAGCCCC 
ATAGGAAAGA CACATTTGGC TGTTGAGGAC TTCAAGCGTG GGATCAAACG TGACAAAACT 
CACTATCCCG TGCTTAAAGA TGATCGGTAC TGGGACAACT TTTATCGGTC GTTTGTTGTT 
ACTGCCGTAA CACATAACGT TGACAAAGTT CTAGATCCGA CGTACATCCC TACCAATCCT 
TTGGAGAAAT CCCTTTTTGA AGAACAGAAC AAGTTTGTAT ATTCTGCTCT AGAGCATACT 
CTCCAGACGG ACATGGGCAA GAACATTGTA CGCGAGCATA GTTTCGACTT CAATGCCCAG 
GAAGTTTTCC GTAAGGTTGT GAAACACTAC ACAGAGTCCG CTAGCGCGAA GATTAGTTCG 
TCTACTACCC TGGGATACCT TACAACTGCA AAGTACGGAT CGTCATGGAC TGGCACAGCA 
GAAGGTTTTA TTCTTCACTG GAAAAATCAC TTGCGCATCT ACAACGACAC TGTTCCTGCT 
GGTGAACAGC TCCCTCAGCA ACTATGCCTT AGTCTTTTGG AGAATGCTGT TCATGATGTA 
CCTGAGCTTC GACAGGTAAA AATCACTGCA ACTCTTGACT TAGCAAAGGG AGGTAATCCT 
ATTAGCTATG ATGGTTATCT CAGTCTACTA CTCGCATCGG CATCACTCTA CGACAACGGC 
AATAATCTAT CTAATTCTCG TAGTGGCAAG AACAAGCGCA ACATCTATGC TAATGAACTA 
GAGTACAATC CGATGGATTT TGAGAGTAAA CCGGATGTAG ACTATGATAT AGATGTGTCA 
CCGACCGCAA TCTACAAAGC CAATGCTCAT GCCCGTAACA GCAGTTCCCG GAGTCGTACT 
CCGGCAGCTA ATCGCGAGCG ACCTTACATC CCTCGTGAAA TGTGGAACCT ACTCTTCGAC 
GATGCCAAAG CCATCCTCCA AGGCTTAAAA GCCCCCGGGA AGCAGGCCCC ATTGAATAAT 
AGTTCGCCAC ACCAATCGTT GCAGACCAAT ACGCACGATA CCATTGGCGC GGAACAAATC 
ACAACGGACA CCTTCCATGA TTGCGCACCC GAAACTGAAT TGCTTGCCCA CCTGACTGAG 
CGTGTTAGTC GCATGAGCGA CGGCGACATA CGTAACGTTC TTGCCGCATC TCGTGATGGT 
CCCCCCTATG ATGAGCCCAA ACCACTGCAA TCTAACGTAC TTCAATATCA AGTGTCTCGT 
CACAACGTCA TTGAAACTAC GGCAGCCCTC GTCGACCGTG GAGCCAATGG AGGTCTTGCC 
GGCAGTGATG TCATGGTCTT GCACAAAACA GGTCGTTCTG CAACCATCAC AGGCATCAAC 
GATCATACCT TGTCCGATTT GGACATTGTC ACCGCTGCTG GCTACACTGA ATCCCAAAAT 
GGCCCCATCA TTCTCATTAT GAACCAATAC GCCCATTTGG GACAGGGTAA AACTATCCAC 
TCCAGTGCAC AGCTTGAACA CTATCGCAAC CATGTCGAAG ACCGTTCCCG TACCGTAGGA 
GTTAACCAGC GAATTGTAAC ATTGGACGAC TACATCATCC CATTGCACAT TCGACAAGGA 
CTCGCGTATA TGGATATGCG GCGCCCTACC GACAAGGAAC TTGCGTCCCT TCCACACGTT 
GTCCTAACCT CCGACGTCGA CTGGGATCCC TCCGTACTTG ACCACGAAAT TGATCTCGCG 
ACCTCTTGGT ATGATGACAT ATACGATTTG CCTCAATCAC CTTACGTCGA ACCATGTTTT 
GACCATACAG GCAAATACCT CCATCGTCAC ATTTCCTTTT GCAACCATCG CGATGACGCC 
GTTGACCGTG TCTTATATTG CCAACAGCAC CTCGTCACGA AAAATGTGCA AGATTATGAG 
GCCCTTCGTC CGTGTTTTGG ATGGGTCTCT GCTGAAACCG TTCGCAAGAC CATCATGGCG 
ACCACGCAGC ATGCACGCGA AGTATATAAC GCTCCGTTAC GCAAACATTT TAAGTCTCGC 
TTTCCCGCTC TAAATGTACA CCGTCGTAAT GAACCAGTTG CTACCGATAC CATTTGGTCC 
GACACCCCTG CTGTCGATAA TGGTGCTAAA TTTGCACAAC TTTTCGTTGG TCGACGGTCC 
CTTGTCACCG ACGCTTACCC CATGAAAACT GATAAAGAGT TTGTCAATAC CCTTGAGGAC 
CATATCCGTT ACCGGGGTGC CATGGACAAA TTGATTAGCA ATCGTGCCCA GGTTGAAATC 
AGCAAAAAGG TCACCGATAT TACACGCGCA TATAATATCG ACCAGTGGCA AAGTGAACCA 
AACCATCAAC ACCAAAACTT TGCCGAACGT CGTATCGCCA CTATCGAGGC TAATACCAAC 
AACATTCTCA ATCTTTCCGG TGCCCCTGAT TCCGCCTGGT TACTTTGCGT GACATATGTT 
TGTTATGTTT TCAACCATTT GGCACATGAT TCACTAGATA ACCGCACTCC CCTTGAAGTC 
CCCACCGGCT CCACGCCTGA TATCAGTGTT CTCCTTCAGT TTCATTTTTG GGAACCGGTC 
TATTATAAGC TCGAAAATGC GACATTTCCT TCTGGTGGTA CTGAACAACA AGGACGTTTT 
GTTGGCATCG CCGACTCCGT CGGCGACGCT CTCACTTATA AGATCCTTAC CCACACCACC 
AATCGCATTC TTCATTGCTC TAGTGTCCGT TCTGCGACCA TTCCCGGACA AACCAACCTA 
CGCCTTACGC CACAGGATGG GGAGAGTGGT CCTAAACCCA TCAACTTTAT CAAGTCGCGT 
AGAACCGAAA ACAAAAATTC CTATGCCATT AAGGAGTTGC CTGGTTTCAC ACCTGATGAC 
CTTATAGGTT GTACGTTCCT CACCGACACT CGGGATGATG GGGAGCGTTT GAAGGCACGA 
ATCACGCGGA AAATATTGGA CCCAGACAAG CCCTCGGATG TAAAGGTCCT TGTCGAAATC 
AATGATGGTG AATATGACGA GATTCTAGCA TACAACGAAA TTCTAG 

 

Protein sequence

MVPATRQMTS AAVYAHLLDN VLLPQGHPIR LSFEQQGYES ADDLLCIFEN ELESLGYTPS 
VLPDGPENPP TIPLLMAHRQ IIRHFLRWQA SLEQQKGTPL KNSELVALNN EDFVIYRRSA 
LGQVSTATAP VNASPTVQSP IGKTHLAVED FKRGIKRDKT HYPVLKDDRY WDNFYRSFVV 
TAVTHNVDKV LDPTYIPTNP LEKSLFEEQN KFVYSALEHT LQTDMGKNIV REHSFDFNAQ 
EVFRKVVKHY TESASAKISS STTLGYLTTA KYGSSWTGTA EGFILHWKNH LRIYNDTVPA 
GEQLPQQLCL SLLENAVHDV PELRQVKITA TLDLAKGGNP ISYDGYLSLL LASASLYDNG 
NNLSNSRSGK NKRNIYANEL EYNPMDFESK PDVDYDIDVS PTAIYKANAH ARNSSSRSRT 
PAANRERPYI PREMWNLLFD DAKAILQGLK APGKQAPLNN SSPHQSLQTN THDTIGAEQI 
TTDTFHDCAP ETELLAHLTE RVSRMSDGDI RNVLAASRDG PPYDEPKPLQ SNVLQYQVSR 
HNVIETTAAL VDRGANGGLA GSDVMVLHKT GRSATITGIN DHTLSDLDIV TAAGYTESQN 
GPIILIMNQY AHLGQGKTIH SSAQLEHYRN HVEDRSRTVG VNQRIVTLDD YIIPLHIRQG 
LAYMDMRRPT DKELASLPHV VLTSDVDWDP SVLDHEIDLA TSWYDDIYDL PQSPYVEPCF 
DHTGKYLHRH ISFCNHRDDA VDRVLYCQQH LVTKNVQDYE ALRPCFGWVS AETVRKTIMA 
TTQHAREVYN APLRKHFKSR FPALNVHRRN EPVATDTIWS DTPAVDNGAK FAQLFVGRRS 
LVTDAYPMKT DKEFVNTLED HIRYRGAMDK LISNRAQVEI SKKVTDITRA YNIDQWQSEP 
NHQHQNFAER RIATIEANTN NILNLSGAPD SAWLLCVTYV CYVFNHLAHD SLDNRTPLEV 
PTGSTPDISV LLQFHFWEPV YYKLENATFP SGGTEQQGRF VGIADSVGDA LTYKILTHTT 
NRILHCSSVR SATIPGQTNL RLTPQDGESG PKPINFIKSR RTENKNSYAI KELPGFTPDD 
LIGCTFLTDT RDDGERLKAR ITRKILDPDK PSDVKHTTKF