Gene PHATRDRAFT_32339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_32339 
Symbol 
ID7196925 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp2239258 
End bp2241705 
Gene Length2448 bp 
Protein Length666 aa 
Translation table 
GC content43% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176939 
Protein GI219110375 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000123305 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCCTC ATGAAGTAAA AAAGAGTATT GCCTACATCA ATGGCCACGA AGTCCAAATT 
ACGCTGGATG CAGCCAAGAG CAGTGCACCA CCTAGTGTTA TTGGAAAAAT GCTCCATTTA
CAAACTGGCA ACATCTTGTC GGACTCTTCT TTGCAACACA TAAGGATACA GTCGGGAAAA
GAGCAAGAAA CAGTGTTGCT CAAGGATGAA GAATTCATGA CGCAGGCAGA CAAGCTTTTG
TCCTATCTTG AGAACACTCC TGAGATCAGC TTTTGTGCTA TATACGATGA CCCAGATTCA
CCTCTCTTCA CAGTTTACAA GCAGAGAGCA AAAAAAGACC GCAGGTGTCT ACCCACAAGT
ATTAGAGTTA ACTCCGGGGT ATCTGCTGAA ACGGGAATTC TTGACAACGC TACACTAGAT
GCAATGGATC CCAATGGAGA ACTTGATGAC TATGTTGACC GCACACGTCG CGCATTCAAG
CTCCTTGGCT CACAAAAAAT GCTGTTAGGA GTTGCCTGGA CAAATAATGA GAGCAGAAAT
GTATTCTCTC GTTTTTCGGA GATAATGGTA GCAGATGTGA CGGAAGGCAC AAACAACGCC
AAGCGACCGC TATTTCTATT CTCTGGGAAG ACGTCAAACC AAAACACTTT CACAGCACTG
TGGGCTTTTT TACCACAGCA GGCTCGTTGG GCCTTCCATT GGGTGTGGAC TTGATGCATA
CCGCAACTAC TCCCAAAGTA AGGAATTCAA CAAATTCGCC TGACAATAAC AGATGGAGAT
CCAAAAGAGT ACGGGACCTT TGTAGATGCA ATACCAACTT TCTACCCTCT TTGCGAACAC
AAGCTTTGTC ACTGGCATCT ACTGTATCGC AGTAATCTCA TGAAGGTGCA GACTGGAAAA
TGTGGAGTTA AAGCTACTAT TCTATTCCGT GTAGTTGTTC TTTGGATTGA GAGCTGGATG
ACCAAAATTG AGACACAAGA GGAATACGAA CTTTCTAAAA GGCTCTTGGC TGATTGGCTT
GCAACCCCCG AAGCTATTGA TGTCAAATTG GGTGGTATGG GGCAAACTAT TGTATCGCAA
ATTAATGCGT ACATGACACT GTCACTTTTT CCTCATGAAC AGCGCTGGGC TAGATATCGC
TATTTATACA CACGAGCATT CAACACATCT GCAAGCTCGT ATGCCGAGGC AGAAAATAGT
GCTTTAAAAC GACGGGGCGA CGGGGTCAGG CCAAGCTTTT CCGTACCAAA AGCAACTCAG
GTTATAAATG AAGGGACACA AATTAGGTCA AAGAAGAGGC ATCAAAAAGC TGTTTACAAT
TTAAATGCTG CCAAGACGAG AAAGCCTGCC TACTACGCAA ACATTGGGGA TTTAGTGGAT
TACATTCAAG ATTCTCTTTC CAAAGATTTT GAAGCAGCTG CTTCATTTGT GCTCTTCCGT
CCAAATGCAG ACCAGTTTTG GGTCAAGCAA GCCACTCGCA AAAGCAAAAA CACGGACATT
CGGAAAATCA ACGACAGTAG CTATTACAAG TATATGATTC CGCAGTTTGA ACGCACACGA
ATTGTGGAGC TTGTTAATAT TGATGGTACA TTCTATTTGG TGTGTAGCTG CGGAAAATTT
CAGCGACAAG CTTCCCCATG TGCCCATCTT TACAAGGTTC TTGGTCAATC ACCCACATCA
ACCGATGTCT CTGTACGCTG GACAAAGCAC TGGGATGTGT ATTTGCACCG AAGTGGCCAC
AGTGACCTGT CAAAGCATTT GGAAGACCTG TACAAACAGG AGCGACCAGG TCCAGTATTT
GTTGATAGTG GTCAGTGGGT GATCGGAAAA GGTGAAAAAG GGTCATATTT TTTCGAAACT
TCGCTTCCGT ACAAGCCCCC TGTCATACGA GATTTTAATC AATGGGCAGT GTCTTCGCAA
ACGACTGGAG CTGATTTGAG TGGGACCAAA AATACCACAA ATATGTATTT TTCGAGTGGA
ATGGTGCAAG AATCAACAAG CCTGTCCAGA GAGCATGCAT TCCAGGATTC ATTGCATGAA
AATTCCACAA ATTCGCAAAA TTCGGATTGT TTTGATGATA CACAGGCAGT GACAACGGAA
AGTGTATCTT CTACAAAAAG AATGTTTGGC TCAAGTGCTT TTGTGCACAA TTCCATTTCT
ACCAGGAAAT GTCCAAGCTG GCAGGATTTG ATATGGAAGC TGCTGAGTCG ATGAATAAAG
CTATGCAAGA AGCATTGGAA AAGGTACAAG CCAATGTTGC AAAAAGGGCT GGGAAGATGG
ATTACACTAT AGGACCAGCC ATTACAAAGG ACCATGTAGG TCTAAGATTG AAGCCAAGCT
ACAGTCCAAA GAAGAGGAGG AAACCAAACT TACAAAGGAA ATGAAATAAT TTTACTTACA
ATTACTGATT TACATTAAAC AATACAGGCG TTCTTCAATA GTCTGTAA
 
Protein sequence
MEPHEVKKSI AYINGHEVQI TLDAAKSSAP PSVIGKMLHL QTGNILSDSS LQHIRIQSGK 
EQETVLLKDE EFMTQADKLL SYLENTPEIS FCAIYDDPDS PLFTVYKQRA KKDRRCLPTS
IRVNSGVSAE TGILDNATLD AMDPNGELDD YVDRTRRAFK LLGSQKMLLG VAWTNNESRN
VFSRFSEIMV ADVTEGTNNA KRPLFLFSGK TRLVGPSIGC GLDAYRNYSQ NGDPKEYGTF
VDAIPTFYPL CEHKLCHWHL LYRSNLMKVQ TGKCGVKATI LFRVVVLWIE SWMTKIETQE
EYELSKRLLA DWLATPEAID VKLGGMGQTI VSQINAYMTL SLFPHEQRWA RYRYLYTRAF
NTSASSYAEA ENSALKRRGD GVRPSFSVPK ATQVINEGTQ IRSKKRHQKA VYNLNAAKTR
KPAYYANIGD LVDYIQDSLS KDFEAAASFV LFRPNADQFW VKQATRKSKN TDIRKINDSS
YYKYMIPQFE RTRIVELVNI DGTFYLVCSC GKFQRQASPC AHLYKVLGQS PTSTDVSVRW
TKHWDVYLHR SGHSDLSKHL EDLYKQERPG PVFVDSGQWV IGKGSDNGKC IFYKKNVWLK
CFCAQFHFYQ EMSKLAGFDM EAAESMNKAM QEALEKVQAN VAKRAGKMDY TIGPAITKDH
AFFNSL