Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_32314 |
Symbol | |
ID | 7196758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 2184850 |
End bp | 2186016 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177464 |
Protein GI | 219111425 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.20432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAGGCA AACTGTGGAG GATTGCCGCC ATCGTCTCGG TCGGGATCAT CGCGATGCTG ATGGCGAAGT CCGGCCCTGA GCTTGACTGG GAAGACGACA TTCTTCCCAA AGCCCGACAA AAATATGATC CAACAATATC CTACAGCGTC AGCAAACCCT TGTCGAATCG AGTGGTCGTT GTCACTGGCG CAACCAGTGG GATCGGTCTT GGTCTGACAC GAGCGCTTTC TAGTCTGGGT GCAAGTGTGA TTGTGGTAGG AAGATCCAAG CGAAAATTGG CACTGCTGCA GGCTGAGATT CCGACAGTCC GCCCAATACT AGCAGACTTT TCCGACTTGG CGGCAGTTTC CTATGCGGCG ACTGAGATTG CTCAAATGAT AGATCAGGTA GATATCCTCA TCAATAACGC TGGAATGCAT GCGGCATTCA ACCAGTGGAG TATGTCGAAT CAAGGTTACG ACACGGTATT TACGGTGAAC TACCTTTCGC ATTTTCTGCT TACCGAAATC TTAGCGCCAA AACTTGCCAA CTCATCCCAG CCCCTCATTG CGCAAGTGTC CTCTTCCTAT CATTGGGCCG TGGACGGTTC AGATCTGATG GTACACGATG AATCTGTCGG ACCCGTCGCG AGTCAACCAG GAGGTTCTCA CGGCTTTTAT GTATTTCGGT CGCAGAGATC TTATGCAAAC TCCAAGCTCG CTCAGATTTA CCACGCAAGA GCATTGAAAC GCAATCAGCC ACTTCTCCAA GATGCTAGAA TTGTCAGTAT TTGCCCTGCA TGGGTTGGAA CGAACATCGC TGCAAGGTTT GGCTCCATGA TTCACAACAT AGTTGTTGCC AGCGGCTATT CTCCGGACGC TTGGGGCATT GCGTCAAGCT TGGAGGCCAT TCTAGGAGAC AATTATGAGG AAGACTTTTT CATGAACTCC AAGGTTTTTG ATCTATTTCC GGCACTCAAC CAAATTTTGT CCCCAGCTTG GATGTATCAT ACTGGAATAC GGGATGCAGT TGCTTTTTGC ATGGCGTCCG CATCAATGCA GCTGCAACGA TTCTGGCCGC ATGCTCACCC TAGTCCGTCT TCCTTGGAAT CCTACAATGA AACAATTGGG AATTCTTTGT ATGAATGGAG CTTGAGAGCT GTGGGAGAAT TCAACCGCAA CGCCTAG
|
Protein sequence | MAGKLWRIAA IVSVGIIAML MAKSGPELDW EDDILPKARQ KYDPTISYSV SKPLSNRVVV VTGATSGIGL GLTRALSSLG ASVIVVGRSK RKLALLQAEI PTVRPILADF SDLAAVSYAA TEIAQMIDQV DILINNAGMH AAFNQWSMSN QGYDTVFTVN YLSHFLLTEI LAPKLANSSQ PLIAQVSSSY HWAVDGSDLM VHDESVGPVA SQPGGSHGFY VFRSQRSYAN SKLAQIYHAR ALKRNQPLLQ DARIVSICPA WVGTNIAARF GSMIHNIVVA SGYSPDAWGI ASSLEAILGD NYEEDFFMNS KVFDLFPALN QILSPAWMYH TGIRDAVAFC MASASMQLQR FWPHAHPSPS SLESYNETIG NSLYEWSLRA VGEFNRNA
|
| |