Gene PHATRDRAFT_32314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_32314 
Symbol 
ID7196758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp2184850 
End bp2186016 
Gene Length1167 bp 
Protein Length388 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177464 
Protein GI219111425 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.20432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGCA AACTGTGGAG GATTGCCGCC ATCGTCTCGG TCGGGATCAT CGCGATGCTG 
ATGGCGAAGT CCGGCCCTGA GCTTGACTGG GAAGACGACA TTCTTCCCAA AGCCCGACAA
AAATATGATC CAACAATATC CTACAGCGTC AGCAAACCCT TGTCGAATCG AGTGGTCGTT
GTCACTGGCG CAACCAGTGG GATCGGTCTT GGTCTGACAC GAGCGCTTTC TAGTCTGGGT
GCAAGTGTGA TTGTGGTAGG AAGATCCAAG CGAAAATTGG CACTGCTGCA GGCTGAGATT
CCGACAGTCC GCCCAATACT AGCAGACTTT TCCGACTTGG CGGCAGTTTC CTATGCGGCG
ACTGAGATTG CTCAAATGAT AGATCAGGTA GATATCCTCA TCAATAACGC TGGAATGCAT
GCGGCATTCA ACCAGTGGAG TATGTCGAAT CAAGGTTACG ACACGGTATT TACGGTGAAC
TACCTTTCGC ATTTTCTGCT TACCGAAATC TTAGCGCCAA AACTTGCCAA CTCATCCCAG
CCCCTCATTG CGCAAGTGTC CTCTTCCTAT CATTGGGCCG TGGACGGTTC AGATCTGATG
GTACACGATG AATCTGTCGG ACCCGTCGCG AGTCAACCAG GAGGTTCTCA CGGCTTTTAT
GTATTTCGGT CGCAGAGATC TTATGCAAAC TCCAAGCTCG CTCAGATTTA CCACGCAAGA
GCATTGAAAC GCAATCAGCC ACTTCTCCAA GATGCTAGAA TTGTCAGTAT TTGCCCTGCA
TGGGTTGGAA CGAACATCGC TGCAAGGTTT GGCTCCATGA TTCACAACAT AGTTGTTGCC
AGCGGCTATT CTCCGGACGC TTGGGGCATT GCGTCAAGCT TGGAGGCCAT TCTAGGAGAC
AATTATGAGG AAGACTTTTT CATGAACTCC AAGGTTTTTG ATCTATTTCC GGCACTCAAC
CAAATTTTGT CCCCAGCTTG GATGTATCAT ACTGGAATAC GGGATGCAGT TGCTTTTTGC
ATGGCGTCCG CATCAATGCA GCTGCAACGA TTCTGGCCGC ATGCTCACCC TAGTCCGTCT
TCCTTGGAAT CCTACAATGA AACAATTGGG AATTCTTTGT ATGAATGGAG CTTGAGAGCT
GTGGGAGAAT TCAACCGCAA CGCCTAG
 
Protein sequence
MAGKLWRIAA IVSVGIIAML MAKSGPELDW EDDILPKARQ KYDPTISYSV SKPLSNRVVV 
VTGATSGIGL GLTRALSSLG ASVIVVGRSK RKLALLQAEI PTVRPILADF SDLAAVSYAA
TEIAQMIDQV DILINNAGMH AAFNQWSMSN QGYDTVFTVN YLSHFLLTEI LAPKLANSSQ
PLIAQVSSSY HWAVDGSDLM VHDESVGPVA SQPGGSHGFY VFRSQRSYAN SKLAQIYHAR
ALKRNQPLLQ DARIVSICPA WVGTNIAARF GSMIHNIVVA SGYSPDAWGI ASSLEAILGD
NYEEDFFMNS KVFDLFPALN QILSPAWMYH TGIRDAVAFC MASASMQLQR FWPHAHPSPS
SLESYNETIG NSLYEWSLRA VGEFNRNA