Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_32183 |
Symbol | |
ID | 7196243 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 1899621 |
End bp | 1900509 |
Gene Length | 889 bp |
Protein Length | 246 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177397 |
Protein GI | 219111291 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0549576 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTCTT TTAACAAGAA GATCCGCGAC ACGAAACACA AAGATATTCG AGGGCCGGAG ACACTTTGGC CAGACCGATC CAAGGCAACG GTTCTTTCAC TGTCAATCGG AGGCAATCAA GACAAAATTC TGTCCACGCC TGATTACATA CTTACTTCCC CTATTCTGTT CGATAGCAAG ACTGATGGTG TAGCGGGCAG GATTTACGAA GATCCCAAGC CAATTTCCCT ACGCAGGACT CCGAAGCGCT GGACGGAGGA GGTAAGATGA TGGCTTCGGT AGATTACCCG GATGACGAAA CTCTTGTGCT CATTGCGTTC CTCTATTTTC GAAAATATCA GGAAGATGCC GCCCTCCTGA AACTAATCGA AACAGGAGGA TTGCGTGAAG CTGCTGAGAG GGGACTACCG GAAGTGTGGA TAGAGCTTGC AGATCTTTTA AATAATGGTC GAACCAACAA ACAGTGTCGT GACCGCTTCC AAAATCACCT GCGGACGGGT ATCAAAAAGG GCAATTGGAC CAAAGAGGAA ATCAAGCTGA TTGAGGACAT GTACAAAAGC TTCGGCTCAA AGTAAGTGAT AATTGCATAT TCCACTGTCA TGACACTCCG CCTACAATCC TGAACTTCCT CTCGAATAGG TGGAGCTCAA TTGCTCAAAT CCTGACGCAT CGAACAGAGA ATGACGTGAA AAACAAATGG TATGCCATGA AACGCGTAGA AGAACGGAAA ACACACTATA TCGAGGAATT CAAGTCTCAA AGAGCTTCCT GCCGCACGTC AGCCCCAGCT ATCAAACGTC GGTATGAATC CTCTCGAGCA GCACAAATGA CACATCCACG AGCTGGGTCA AACGGTGCGT GTTTCAATGA AGCAAGTACG GATGTCTGA
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Protein sequence | MDSFNKKIRD TKHKDIRGPE TLWPDRSKAT VLSLSIGGNQ DKILSTPDYI LTSPILFDSK TDGVAGRIYE DPKPISLRRT PKRWTEEEDA ALLKLIETGG LREAAERGLP EVWIELADLL NNGRTNKQCR DRFQNHLRTG IKKGNWTKEE IKLIEDMYKS FGSKWSSIAQ ILTHRTENDV KNKWYAMKRV EERKTHYIEE FKSQRASCRT SAPAIKRRYE SSRAAQMTHP RAGSNGACFN EASTDV
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