Gene PHATRDRAFT_31973 details

Gene Information

• Locus tag: PHATRDRAFT_31973
• ID: 7196453
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: -
• Start bp: 1378558
• End bp: 1380522
• Gene Length: 1965 bp
• Protein Length: 654 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002177281
• Protein GI: 219111059

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCCGG ATGAGAACTA TAAACCAAAC TTGGTGGAAG AGGAAAAGAC GTCGATTATG 
CAGGTCATCG CGCCGGACCC AAACTATCAG AAAAGGCTGC AAGAAGAACA AAATTCGAAG 
AGAATTCCTC CTTCCGAAGC TTTTCAACAA CGTGTGCAAT GCATACATTG TCATAAGTAC 
ACACCCGGAA TGGTAGTCCA GCAGCCTGCA AAGGCTTCAT CGGAGGCTGC GAGCACCCAG 
TCGAACGCTC GCCGTCTTAC ACCGACAACA CCTGGCTTTC ATACTCCTTC TCCTACGACG 
CCACTCACTC AATCATCCGA TCATGTTAAT GGTTCGGAAG TTCATTTAGT GGAGCATCGT 
GTCCTGCTGG CCGTCCGAGA TACAGCGTTT GATTTAGCGT CACCGGAGTT TGCCAAGAAA 
TCATCCAAAG ATGTCTTTCG CTGGCTCGCT AGTGCACAAC CCATCAACGA CAAGCTTCAA 
AAGCGATTGG AACGCCGCAT TAGTGCAGAC CCATCGATAT GTAAAGCACG TTCTCATGGC 
ATGGAACCCC TCTGTCCCGA TGGACTTACT CCGTTTTTGC TGGCGGCCCA TTCCAACCAA 
GTTGCGGCAG CCAAAATTTT ACTCCTATTG GGACCCCGAA CCGAGCAATT GCAGACCGTT 
AATTTACAAG GCAAGTCAGC ATATCACCTT GCCGCAACTC GCGGCAATCT CGAATTTCTT 
GATTACATCA AGACCGTATA CGAAGATCCG CAAAATGGGA CTCTCTTCTC TTCCCCGACA 
CCCGTTGACT TGCTGGGACG TACACCGCTC GGGGCCGCCT TAACGAGTCC TGAACCCCAG 
GCCAAGCGAA ATAAACAAAC AATGATGGAC AGGTTGTTCT CACCCCAAGA CATGTCGATT 
TTGGGTAGTC CCGCCCCTGT AACGCAGAGA ACAGCGACAC TTTCTGAACT ACAGCTTGCG 
TACGGATCTT CCCACATGCC TGGCAAGCGT ATTATGAATG AAGACGCAAT TCTGACAACC 
AAGATCCTTC TCAGCGACGA TTCTACTGTA GGAGTCTTCG GCGTCTTTGA TGGCCATAGC 
GATGCTGGAA AGGTTTCGAA CTTTATTGCG TCTCAGATTC CACACGCTCT ACGCGATGCG 
ATGCAACAAG CAGGCGACTG GAACAGCTGG TGTCGACATG CATGTCTCGA AATTGATGCG 
AATTTGAAAA AAAGCAACAT TGCAGGTGGT TCAACCGCCG TCTTTGCCAT AATTACGCTG 
GATCAAATTG TTGTTGCCAA CGTGGGTGAC AGTCGCTGTA TTCTAGTACA ACACGATTCA 
GTTAGTGTGA GCAATGTCGC GGAGGGTGTG GAAAGGCTAT CCATTTCTGA AACGGTATAC 
CCGCAAACAG GGACCGAAAC GAATACCTTA AGTGGCGCGT TTTTAGTAAA GGCGTTGTCA 
GAGGATCACA AACCCGAGGC TTCGGCGGAA CATGCCCGTA TTCAAGCCGC AGGCATGACC 
ATCACGGAGG AACGGTTCGA AGAAGATGGC GAAGAAGTTG TCATTCACAA GGTCCGGTTG 
TCGGACGGCA ATCGCATGGC ATGTTCCCGC TCCTTTGGAG ATTTTGAATA CAAAGCCAAC 
GAGACTTTAG AGGCCGAATC GCAAGCTATA GTTGCTGTTC CTGACGTTGT CGTTCACGAA 
CGCAGTCATG CTGACTGCTA TCTTGTTTTG GCGTGTGACG GCATTTGGGA TGTCATGAGT 
AGCGATGAAG TGGGACAATT TGTAGTGGAG CACATCAAAT CATGTGGCGA AACAGAAGGC 
GTTTTGCCCG AGGTTGGTGA CCGGCTGCTG GCGGAATGTT TGCAGCGCGG CTCTGGAGAT 
AACCTCAGTG CCGTCGTGGT AGCCCTCTCA AACTCAGCCG AGCATTTGTC TTCTGGACAA 
GTGTTGAAAG GCAAGGCACT GGATTTTTCG GGAACGCCAC CGTGA 

 

Protein sequence

MAPDENYKPN LVEEEKTSIM QVIAPDPNYQ KRLQEEQNSK RIPPSEAFQQ RVQCIHCHKY 
TPGMVVQQPA KASSEAASTQ SNARRLTPTT PGFHTPSPTT PLTQSSDHVN GSEVHLVEHR 
VLLAVRDTAF DLASPEFAKK SSKDVFRWLA SAQPINDKLQ KRLERRISAD PSICKARSHG 
MEPLCPDGLT PFLLAAHSNQ VAAAKILLLL GPRTEQLQTV NLQGKSAYHL AATRGNLEFL 
DYIKTVYEDP QNGTLFSSPT PVDLLGRTPL GAALTSPEPQ AKRNKQTMMD RLFSPQDMSI 
LGSPAPVTQR TATLSELQLA YGSSHMPGKR IMNEDAILTT KILLSDDSTV GVFGVFDGHS 
DAGKVSNFIA SQIPHALRDA MQQAGDWNSW CRHACLEIDA NLKKSNIAGG STAVFAIITL 
DQIVVANVGD SRCILVQHDS VSVSNVAEGV ERLSISETVY PQTGTETNTL SGAFLVKALS 
EDHKPEASAE HARIQAAGMT ITEERFEEDG EEVVIHKVRL SDGNRMACSR SFGDFEYKAN 
ETLEAESQAI VAVPDVVVHE RSHADCYLVL ACDGIWDVMS SDEVGQFVVE HIKSCGETEG 
VLPEVGDRLL AECLQRGSGD NLSAVVVALS NSAEHLSSGQ VLKGKALDFS GTPP