| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_31948 |
|---|
| Symbol | |
|---|
| ID | 7196444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | - |
|---|
| Start bp | 1315748 |
|---|
| End bp | 1316848 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177266 |
|---|
| Protein GI | 219111029 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.115339 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAAA TCAATGAAGG TATGTTTCAG GCAAGCTTAG CACAGCACTG GTGGATCCGC
TGTGTCGGTG CGTTGTGTCT AACGGCTACA CTTGTTGATG GACTGTCCCG TGCCCTTGTC
TCATCCAGGA GCGTGGATGT AAATGCCCTG CTCTCATCGT GTGTAGATGC GTGTGTACGA
GGGTGCCATG AGATCCGCGA CGTCCAAGAA GAAAGGGACC AAGGGTCGTC CTTCCATGTG
GAATTCAAAG ATTCATCTGA TCCAAGGTCA GCGCTTACGG AGGCTGACAG TAGAGCTCAA
AAAGCTATTG TCGCTGCTTT GAAACAAGAT TGGGGGCCCG AACTAAGAAT CATCGGAGAA
GAGGACCCAA AGGATGGATT TCTTTCGGTT GCAACAAACA AAACAGCACT ACGGATCAAT
CTGTGCTCAT CCATTTTTAA GGAAGACTGT GACATGCAAA CTCTTTCGGA CATCATTGTA
TTTGTGGACC CTCTGGATGG AACAAGGGAA TTCGTCGAAG GACGGCTTCA AAACTGTCAG
GTTCTGATTG GTATTTCTGT CGGCGGAATT GCGTCAGCAG GGGCAATCGG AATTCCTTTT
CCAACAGGAA ATTTAGACGA ATCGCCCACA GTTGTATATG GGAAAGTCGG ACTCGGGCAC
GGGATTATTG GAAGCCCACT TCCCAATGCT CATGGTCGGA TTCCGCTATC ACAACCCTTA
CTGGCGACAG GGGATACAAT TCTTCCAATT ATGGCTGAGG CAAGACGTAT AGTGCAAGAG
CATTTTGGAG GTATAAACTG CCTCTACGGA GGTGCAGGGA ACAAGATCCT CGCTGCTGCT
CTTGGACTTG TGGATTGCAC AATACAACAC AAATTTGGTG GCCCGTGGGA CACATGCGCC
CCCGCAGCAG TGCTAAAATC AATGGGTGGT GAAATCACTG ACCTGCTAGG AGAGGATCTT
TCTGTCTATC AAGAAGGAGA GCAAGAACAG TCAACCAGGA GAGGATTTGT AGCCACAGGG
AGAAACTCCC TCATCCCACA CAAAGTTCTT GTTGCGGCCC TGCAGGAATC TAAAAGAATC
ACCACATATA TAAACGGCTA G
|
|---|
| Protein sequence | MQQINEDACV RGCHEIRDVQ EERDQGSSFH VEFKDSSDPR SALTEADSRA QKAIVAALKQ
DWGPELRIIG EEDPKDGFLS VATNKTALRI NLCSSIFKED CDMQTLSDII VFVDPLDGTR
EFVEGRLQNC QVLIGISVGG IASAGAIGIP FPTGNLDESP TVVYGKVGLG HGIIGSPLPN
AHGRIPLSQP LLATGDTILP IMAEARRIVQ EHFGGINCLY GGAGNKILAA ALGLVDCTIQ
HKFGGPWDTC APAAVLKSMG GEITDLLGED LSVYQEGEQE QSTRRGFVAT GRNSLIPHKV
LVAALQESKR ITTYING
|
|---|
| |