Gene PHATRDRAFT_31912 details

Gene Information

• Locus tag: PHATRDRAFT_31912
• ID: 7196484
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: -
• Start bp: 1246600
• End bp: 1247307
• Gene Length: 708 bp
• Protein Length: 235 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002177247
• Protein GI: 219110991

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0177067
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGTTC CGACGATTCC GTCAAGATCC GCAACACCCA AGGCAAGGGG TGTTCCTTGT 
CCAAAAAGGG CAAGAGGGGC AAGGGGAGGC AATGACTCCT CCATCCGGAG TATGAAGGAT 
CCGGACGACC ACGTCGAAGG TGATGAGTAT GACAATGTCG AAATTGAGTC CGCTCAAGAG 
GATGATTCTA CTGCACCTGT GAAGAAAGAA CGGGCGAAAA AGCAGAAGAA TCCGTCAAAG 
TGGAAGCACA AGCATGCCAA GTCTTGTCGA AGCCCTATCT CCTGCCGCGT AGACAACAAG 
AAAACAAGAG CTATCCTAGA CCCAGGGACT GAGTGCGGCA TTGTTGGTGG GGACATATGG 
ACAGTTCTGG AAAAGGTGAT TGGTCTAGAA GCCCAGCTAG GCGGAGCTTT AGCAGGGATG 
GGCACATGCA GTCTGCCACT GGTTAACGCG GTGGCTGCGT ACGATCATTC TAAAGAAGGA 
ACAATCCTAA TTGGTGCCGG TAACGTGGGA CATGATGAAC AAAGCACCCG GACGGAGTTG 
TTGCTCAACA CGCACAAGAT ACGAAAACAC AGTGTCATTG TTTCGGACAC AACCATCCGG 
GATGGAGGGC TTCAAAGCAT TGAAGTCAAC GGAATTTCCA TTGCATTCGA CTTTGTCTAT 
GAGAAAACGG TTTCGTTTTA CCTATGCAAA CCGACCAAAA GGAGCTAG 

 

Protein sequence

MTVPTIPSRS ATPKARGVPC PKRARGARGG NDSSIRSMKD PDDHVEGDEY DNVEIESAQE 
DDSTAPVKKE RAKKQKNPSK WKHKHAKSCR SPISCRVDNK KTRAILDPGT ECGIVGGDIW 
TVLEKVIGLE AQLGGALAGM GTCSLPLVNA VAAYDHSKEG TILIGAGNVG HDEQSTRTEL 
LLNTHKIRKH SVIVSDTTIR DGGLQSIEVN GISIAFDFVY EKTVSFYLCK PTKRS