Gene PHATRDRAFT_31882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_31882 
Symbol 
ID7196165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp1167920 
End bp1168750 
Gene Length831 bp 
Protein Length276 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176734 
Protein GI219109963 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.340464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTACT CCGCTTCACT TGTCGTCGCC TCGACCAAGT CAGAGTTGCC TTATCATTTA 
AATTCTGCCA TAATGAAAGT CTGTCAGGAA GCTTTGGTAC AACGTGGCAC ATTCACAATA
GCACTGTCAG GTGGATCCCT GCCGTCGTTT CTATCGTCGG TAAAAGACGT CTTCGAAGCT
GCCGGGAATG ATCCGAAGTT TGAGAGTTGG CATATCATTC TAGCGGATGA GCGCTGCGTA
CCAAAGTCTC ATCCTGACAG CAACATGGGC GCACTTGAAA ACGACTTTCT CAACCAAGTT
TCTGTTCCGT CAGATCAAGT ACATGCCATA AATACGAGAA AGTTGGAAGA ATCTACTGAT
GCCGTTGCAT CAGATTATCA AGAACAGATT GAAGAAGTTC TATCAATATC GGGTGGACAG
CTGGATCTGG CGGTTCTAGG ATTCGGTCCC GACGGTCACA CTTGTTCATT GTTTCCAAAT
CATGTATTGC TCACCGAGCA GAACAAAATG GTTGCCGCAA TCGAAGACTC TCCGAAGCCA
CCCCCTCACC GAATCACCTT GACATTGCCA GTTTTGAATA AGCACACTAG ACACGTCATT
TTCTGCGGGG CAGGACGTTC GAAGAGTGCT GTTGTGCGGG ATGTATTTAG CGACATTTCT
CCGGCTGATG CAAGCTACTC CGTCCAACAC GGAAATCTTT ACAAAGTAAC ATTATCATCT
CCAGCGCCAT ATCCATGCGC AATGGTTCGT CCTGATTCCG AACAAACGGA AAATAGTTTG
ATGTGGATTG TAGACGCGGA TGCCATGGAA TCAGCCACAG AGCAGAAATA A
 
Protein sequence
MVYSASLVVA STKSELPYHL NSAIMKVCQE ALVQRGTFTI ALSGGSLPSF LSSVKDVFEA 
AGNDPKFESW HIILADERCV PKSHPDSNMG ALENDFLNQV SVPSDQVHAI NTRKLEESTD
AVASDYQEQI EEVLSISGGQ LDLAVLGFGP DGHTCSLFPN HVLLTEQNKM VAAIEDSPKP
PPHRITLTLP VLNKHTRHVI FCGAGRSKSA VVRDVFSDIS PADASYSVQH GNLYKVTLSS
PAPYPCAMVR PDSEQTENSL MWIVDADAME SATEQK