Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_31881 |
Symbol | |
ID | 7196414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 1166349 |
End bp | 1167104 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177231 |
Protein GI | 219110959 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.633922 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGCA AATCAACTCC CAAGGAACTC ATCGAGTCGT TTCCGCATAG CAAGCTCACG CCCATTGCTA CTGCAACGAC CGAACCTGAC TACATGTCGC TCCATCAGCT GCAGTGGGAA ATCAACAACA ACGCTGAGTC AATAGCATCC GTTCTTGGAG ACGGCCAACA TGGTCACCTT TTCCTCGTTG TTCCTGAAGC CGAATACCTT GCAGTGACAG ACGACATTCC CTGCATTCCT CCAATGAAAC CCCCCATGGA CCCGGACCAT GCTGCCAATG CCACGGCTCC TCAAATCCTT GAGGCCAATT GTCAAAACGA CAATTGTCAA AAAATCTACG AGTTGTATCA CAACGCCAAC CAAGCCTTCC GCAACCAACT CATTGAAGCT GTTCCAATCG TGTACATTGA ATCTCTCAGT CATCCCATGC GTGGTTTCAG TAAGGTTTCT CCTCTTGCAA TCCTCTCTCA CCTCAGGGAC GCATTCGGAA AAATTCAATT GGCCGATCTC ATTGCTAACG AAGCTCGCAT GAAAGCCGGT TGGTATCCTC CCATGCCCAT CCAGCAACTC TTTCTGCAAT TTGAAAAGGG CCATCAATTT CTTATCGCTT CAGGCGAAGT CGTCGACGAA CGTGCAATTG CGCGCATTGG ATACCAGATC ATTGAAAAAA CCGGCCTCTT TGAACTAGCA TCTCGCGAAT GGCGCTACAA GGAAGAAGCC GACAAAACAA TGGCAAACTT CAAAAAACAC TTTTAG
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Protein sequence | MTSKSTPKEL IESFPHSKLT PIATATTEPD YMSLHQLQWE INNNAESIAS VLGDGQHGHL FLVVPEAEYL AVTDDIPCIP PMKPPMDPDH AANATAPQIL EANCQNDNCQ KIYELYHNAN QAFRNQLIEA VPIVYIESLS HPMRGFSKVS PLAILSHLRD AFGKIQLADL IANEARMKAG WYPPMPIQQL FLQFEKGHQF LIASGEVVDE RAIARIGYQI IEKTGLFELA SREWRYKEEA DKTMANFKKH F
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