| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_31740 |
|---|
| Symbol | |
|---|
| ID | 7196340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | - |
|---|
| Start bp | 830234 |
|---|
| End bp | 831021 |
|---|
| Gene Length | 788 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177169 |
|---|
| Protein GI | 219110835 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.19026 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAGGCA AAGAAGACGT GGTTGTCAAT AGTTACGAGG TGGTGGAAGA AATTGGCGAC
AACTGGCCGT CCGGCAATAT GCTTCAGAGC GTTCTTGCCA AGGAAGGAAT TGATTTTGTT
GAGATGGAGA AGGATCCTTT GTATTGGCAG GTAGCAGCTC GTTGGAGTCT TCTTCGTATG
TATGGCTTTC CGGAGTTACC CACCGGAGAC CATGCATATA AAAAGACCAG CTCGGGTAGA
ACTCAACTGC ATCTTGGAGA TGCTGAAATC GACAGTATTC AAAATCGTTG GAGCAGTTTG
TCGGCAAGCC AAGATGACCC CAAAAATGAT TTGCTGGAAC TGCTAAAGAC CAGCAAGTCC
AATGGCCGGC AGCTACAATG GTCAGTGATG GATTGCGCCC CTGGCTGCCA GTTCAACTTA
CACGCGCATC CCAATTTAGA GTTGGCATAT TGTGCGAAGG GTGCATTACA CGAAATTCGT
ATGAAAGGAG ACCCAATCAC AAAGACTTTC AAAAAGCATC CAAACAAAAA ATGTCAGCTG
AAGGGACCTA CTCTCACGGA TCTCGATCGA CCGTGGTACT TCTCGACCCT GTCTGCAGGG
GAATGGCTCG TGAACGAAGT TGGAAGTATC CACAAATCCT TCACTGCAAC ATCCGGTGAG
GGCTGTATTC TGCTGGTGCT TTGGGGAGGC TCACACGCCA ATATTCTGGA AGGTGAAGAA
CCGAGCAGAG TCAATGTTCA AGACGCTCTA AACAAAATGG ATGACAAGCT TGGTTCTTGC
GAATGCAG
|
|---|
| Protein sequence | MVGKEDVVVN SYEVVEEIGD NWPSGNMLQS VLAKEGIDFV EMEKDPLYWQ VAARWSLLRM
YGFPELPTGD HAYKKTSSGR TQLHLGDAEI DSIQNRWSSL SASQDDPKND LLELLKTSKS
NGRQLQWSVM DCAPGCQFNL HAHPNLELAY CAKGALHEIR MKGDPITKTF KKHPNKKCQL
KGPTLTDLDR PWYFSTLSAG EWLVNEVGSI HKSFTATSGE GCILLVLWGG SHANILEGEE
PSRVNVQDAL NKMDDKLGSC EC
|
|---|
| |