Gene PHATRDRAFT_31725 details

Gene Information

• Locus tag: PHATRDRAFT_31725
• ID: 7196022
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: +
• Start bp: 777708
• End bp: 779691
• Gene Length: 1984 bp
• Protein Length: 629 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002176653
• Protein GI: 219109799

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTCCTT CTAGCACGAA GGCAGACAAT AACGATGTTT CGACTACGGC AATATCTACG 
CATGTATCCG TAGCGGTGGA ACAAAAAGGG GAAGCAAAGT ACCGTGCTTT AGTGATTGAT 
TCCGGTCCGA TCATTCGTCT CGCTGGCCTG ACGACTCTGT GGCGTCGGGC GGATTCTTTC 
TATACGGTGC CGGCCGTACT GCAAGAAATC CGAGACGCCA AAGCTCGTCA GCACTTGAAT 
ACTCTGCCGT TCGAGCTGAA AACACGTGAA CCGAGCGCGG AAGCAATCCA GGCCGTCGTG 
GAGTTTTCTC GTCAGACGGG CGATTATCCC AGCTTATCGT CGGTGGATTT GCAAGTGCTC 
GCGCTGTTGT ACGACCTCGA AAAGGAAGGA TGTGCAGATA TGAGTCACGT GGGGAAAACT 
CCCAAGCGGA CGGTAGGAGT TGGAAAGATT CAAATATTGG CAAACGATGC CGAAGGTAGC 
ATTACGGCAG CCCGCCTCGA GCCGCAGGTT GATCATTGTG GAATGGACGA CTACTCGCAG 
CAGGAAGCCA AAGACCAATC CATACACGAC GATGGAGAAA GTACGGTGGA CGAGTATGAT 
GATGAAAGTG TGACATCTGA AGACTTAGAA CTGGAAAATG TGTCACAAAC AAATGATCTG 
GTAGTGCCTG CGAGCGCAAA GCCCCCCAAA ACGTGGGCGG CCCTTGTCAA TCCAATTGCC 
GCGTCGAAGG AATTACCAAA GAATGACAGT ATTGCCAAAC CCGTCTTTGA TCAGGCTCTA 
CACATCCCTT TTGGTCGGAT GAGCCTACGC TCGGTGGCCG CAAATAACAA CAAGGAGGAG 
AATGGACAGT TTAGCGATGC AGATAGCGAC CGTGGCTTTT CGTCGGAGGA CGAGGAAAGC 
GACGATGACT TTGACTCCAA TCAGGAAATT AGTGACGAGG AATGCGATGT ATATATATTG 
GATCCGGAGG AAGTGGAGCG AAAGAATAAG ACGTTCGATA CTACAGTGCA AGACGAGCAC 
TTGTCAGACT TTCCAAGTCT CGCTGCCTCA ATCCGTGTTC CATACGAAGA AGCAAATGAT 
GATGAAAGAG ATGCACAAAG GCAAATTGTG GAAGACCGAC GGAAGCAAAA GTCACTACAG 
CCCGTTTCAA ATTCCGGGAA GCTTTACAAC TCATTTCGAA AATATACGAA TTTGATGAAA 
CCCAAGGCTG CCATCAAGAA GAATACCCCA AAGGTGACAT CAACAGTGTC AACACCCGGC 
GAGAAGTACG ACGAACTTCG TACTCAATCC ACAATCGATA ATACCCAGTC ACGAATTATT 
GGCGGCACGG CGTTTGCTGG CCAGGACGCC GATTTTGTCG ACGACGGAGA AGGCTGGATC 
ACTTCTACAA AGGAAATAAA AACCTTACGT GCAGCTGGGA GTTTGGATCC AATGAAGAAC 
TTAGGCAAGA GTGGTGAGCT GGTAACTACT GCCATGGGGC CATCGGTCGG ACAACGCGCG 
GCTTGTACCA CAACTGACTT TGCTATGCAA AATGTAATTT TGCAAATGAA TTTGGAGCTT 
TTATCTGTGG ACGGTATCAA AGTTCGGAAA TTGAAGTCAT GGGTGACTCG CTGTGGAGCC 
TGCTACAAAG TCTACACTAG TCATGAGAGT TCTGGTCCAC TGGGAAAGCG ACTGTTTTGT 
GAGCGATGCG GCAGTGATAT GATCCAACGG ATTGCTGCCA GTGTCGATGG CAAAACAGGA 
CGCCTGCGGC TCCACTTGTC GAAGCGGTAT CGTCACAACT TACGCGGAAC CAAGTATTCG 
TTGCCGAAAT CGGGGTCAGG CAACCGGTTC CAGGGAGATC TTTTGCTTCG TGAAGATCAA 
CTTTTGATGG GAGCATGGAA CCAAAAGGTA AAGATGCGCG GTGGTGGTAA ATCCAGGTCA 
GACGCACAGT CAATGTTTGG TCGAGACATA GCATCGAACG TTGGCTGCCA CACGAGCGCA 
GTAA 

 

Protein sequence

MVPSSTKADN NDVSTTAIST HVSVAVEQKG EAKYRALVID SGPIIRLAGL TTLWRRADSF 
YTVPAVLQEI RDAKARQHLN TLPFELKTRE PSAEAIQAVV EFSRQTGDYP SLSSVDLQVL 
ALLYDLEKEG CADMSHVGKT PKRTVGVGKI QILANDAEGS ITAARLEPQV DHCGMDDYSQ 
QEAKDQSIHD DGESTVDEYD DESVTSEDLE LENVSQTNDL VVPASAKPPK TWAALVNPIA 
ASKELPKNDS IAKPVFDQAL HIPFGRMSLR SVAANNNKEE NGQFSDADSD RGFSSEDEES 
DDDFDSNQEI SDEECDVYIL DPEEVERKNK TFDTTVQDEH LSDFPSLAAS IRVPYEEAND 
DERDAQRQIV EDRRKQKSLQ PVSNSGKLYN SFRKYTNLMK PKAAIKKNTP KVTSTVSTPG 
EKYDELRTQS TIDNTQSRII GGTAFAGQDA DFVDDGEGWI TSTKEIKTLR AAGSLDPMKN 
LGKSGELVTT AMGPSVGQRA ACTTTDFAMQ NVILQMNLEL LSVDGIKVRK LKSWVTRCGA 
CYKVYTSHES SGPLGKRLFC ERCGSDMIQR IAASVDGKTG RLRLHLSKRY RHNLRGTKYS 
LPKSGSGNRF QGDLLLREDQ LLMGAWNQK