Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_31662 |
Symbol | |
ID | 7196301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 645249 |
End bp | 646427 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177131 |
Protein GI | 219110759 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTGAGC GAAGCTGCGC CAACGCTTCT GACGATGACA GCATTCACAA GCAGTCGCCA GAATTGGAGG CTGAGTTTCT TCATACCAGC AAGTTGACCT TAGCCGACAT GCGACGATTG GCGCACGATC CGAAGGATCG GAGGTTGGCA ACAAAACCTG CGGCGCAAGC TACGAAAGAA GACGTCTTGA CGGTACAACC CATGAGTTTC GTAGAACACA CTGCTTGCTG TCTGTTTCTC GCGTTTGGAG TGCCCAATGG CGCTCTGACG ATTCCCATAG CAACGTGGCT GATCGGAAAA TTCGTGGTAC GCAACGTTTT CTTGGCGTTT CTGTTAGCAG GCTGTATACT TCTACCGCTT GCGATACTGC CGCAAGAATA TGTGCCCGCC CGATTGCAAT CGTGGCTTGC TTTGCAGATA CTGAAATATT TTTCTTTCTC TTTGGTCATG GAGGAACGCC CTCCGACAAT GTGTACTGGC AAGCAGCTGA TCGAGCAGCC CGCTCGGCCA CGAATCGTCA CAGCCTATCC GCACGGAGTT TTCCCATACG GAAACGCGTT GACTGTAGTC ACATGGCCGT TGTTGACGGG ACACCATATT GTGGGTTTGG CAGCAAATGC CGCTTTGCGG ACACCGATCT TTAAACAAAT CTTGCGGAGC ATTGGCGTCA AGGACGCCTC TCGAGCGTCG GTACGGAATG CGCTGGAAAC ATGGCCTTTC ACCGTCGGGA TTTCGCCAGG TGGCGTGGCG GAAGTTTTTG AAACAAACCA CTTCAATGAG CACATTCTGT TGAAAGAACG TATTGGTGTC ATCAAGATGG CCATTCGCAC CGGTGCGGAT CTTGTACCAG GCTATATGTA TGGTAATACT AATCTGTACT GGTGCTGGAC AGGGGAAGGT ATTCCTGGAG CTCGGTGGCT ATTGGAGTAT GTTTCGCGTA AAATCCTAGG TTTTGCCCTC GTGCCTATAG CGGGTAGATG GGGACTACCA ATACCGTACA GGACTCCGAT ATTGTGTGTC GTGGGCAAGC CAATACCAAC CATTCATTTG CAAACCGAAG AACCATCAAT GGAGCAAATC GTGGACATTC AGGAACAATT GTCAACAGAA TTGAAATCAA TGTTCGACCG CTATAAGCAC CTGTACGGAT GGGAAGATCG AATGCTAGTG ATCACATAA
|
Protein sequence | MRERSCANAS DDDSIHKQSP ELEAEFLHTS KLTLADMRRL AHDPKDRRLA TKPAAQATKE DVLTVQPMSF VEHTACCLFL AFGVPNGALT IPIATWLIGK FVVRNVFLAF LLAGCILLPL AILPQEYVPA RLQSWLALQI LKYFSFSLVM EERPPTMCTG KQLIEQPARP RIVTAYPHGV FPYGNALTVV TWPLLTGHHI VGLAANAALR TPIFKQILRS IGVKDASRAS VRNALETWPF TVGISPGGVA EVFETNHFNE HILLKERIGV IKMAIRTGAD LVPGYMYGNT NLYWCWTGEG IPGARWLLEY VSRKILGFAL VPIAGRWGLP IPYRTPILCV VGKPIPTIHL QTEEPSMEQI VDIQEQLSTE LKSMFDRYKH LYGWEDRMLV IT
|
| |