Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_31657 |
Symbol | |
ID | 7196299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 635791 |
End bp | 636990 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177128 |
Protein GI | 219110753 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACCAC CGAGAAGCAA CAGGTCAAGG AAAAAAGAGA CTCGACGTAA AGCATTTCTG CATACAGTTG TTGCTACAGC TACTGTCGGA ATCGTTCTAT CGACGTTGAT TCTGGTTTGT ATAACCAACA GGGCTACCGA GGGAGCTTCC ACGCCTACTC GTTTAAGACA TGACATGCTT AATATTCAGC TATCTCGGCA AAATGTCGTT TATCCAAACG CTTCAGCAAC TCATTTCGGG TACAAGATCT CCCCTCGGAT GCAATTCGAC GTAAGAGTCA TTTCCAACCG GGTAGAAGCC ATTTCCGCTC AAGGAGAAAC CCAACGAATA CCGACGTTAC AGTCCCCGGT CGGTGGTGCC TTTGTGCATT TAGGCAAAAC TGGCGGGAGC GCTTTGTCAT CGCTGTTGCG AAATGGGTGT CACTCGTGGT CACCTCACCC CTGTCGAAAC GTAACAGACG AAACAATGGC ATCTCGACTA ATCACAAGCT ACTACCATGT TCCTGATTTC GGCTTACTAC GTCAGTCGAA TCACGATTTC TATTTCATTA CACTTCGGGA TCCTTTTGAC CGTGTTATAT CCGCTTTTGT TTTCGAACAT ATTATCAACA GAAGGGCCCG AGGTGAACCT GTGGAAAACC CAGTTCTGCG AGACAAGCTA GAGCGAGCAT ACCAATGCTT CCCAAGTTTG GAAGCTTATG TTGGCTTTCT AAAGGGGGAC TCACTCGATT TCTCGTATCC GTATCACCAA GCAGTCATCG TCGATAAATC TTGCAAAAAT CTCGCTCGGG CCGCCTTGCA CGGCAAAGTT CGGCCGTTCA ACCACTTCTT TTTCAACTAC CGTCGGATAT TTTCGTTTTT GCCAAAACCA GAGTCACAAA TCTTTCTAGT CACTCGGCAA GAGAATTTGT GGGAAGATTG GGAGCGGGCC AATGTACTAC TGGGTCAGGA GGAACCAGTA ATAATTCCGG CGGACTTGGA TTTCCGGGCT GTCCGGAATA CCACGACCTT GACGCTGCCT GTTACGAGAG GTTTGAGTGC TGATGGAAGG CAGACCCTGT GCACTGCATT GGAGCATGAA TATTACGTCT TTTTCTGGAT TCTCAGGCGC GCCAGAAATA TCCAGTCCGA GCATTTGCAG CAATCTATCG AGAAGGCCAA GGTGAATTGC CCCAAACTGC CATATACTAA CTTCGTCTAA
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Protein sequence | MTPPRSNRSR KKETRRKAFL HTVVATATVG IVLSTLILVC ITNRATEGAS TPTRLRHDML NIQLSRQNVV YPNASATHFG YKISPRMQFD VRVISNRVEA ISAQGETQRI PTLQSPVGGA FVHLGKTGGS ALSSLLRNGC HSWSPHPCRN VTDETMASRL ITSYYHVPDF GLLRQSNHDF YFITLRDPFD RVISAFVFEH IINRRARGEP VENPVLRDKL ERAYQCFPSL EAYVGFLKGD SLDFSYPYHQ AVIVDKSCKN LARAALHGKV RPFNHFFFNY RRIFSFLPKP ESQIFLVTRQ ENLWEDWERA NVLLGQEEPV IIPADLDFRA VRNTTTLTLP VTRGLSADGR QTLCTALEHE YYVFFWILRR ARNIQSEHLQ QSIEKAKVNC PKLPYTNFV
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