| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_31650 |
|---|
| Symbol | |
|---|
| ID | 7195984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | - |
|---|
| Start bp | 616274 |
|---|
| End bp | 618192 |
|---|
| Gene Length | 1919 bp |
|---|
| Protein Length | 590 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | solute carrier |
|---|
| Protein accession | XP_002177123 |
|---|
| Protein GI | 219110743 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.15984 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACTG GCAACATCTC AAGCATTACC GGCGTTCCGC TCAGCCTCGA CGTGAGTGAC
GAAGGAACGA GCGACGACAT TGACAAGTCA GGAAATAACT TCGTTTATGA GACACATGAG
GATCGCGCTA AAGCTAATGG TATGAAATAC ACCGTCTCGG ATGTACCACC TTTGCCTTTG
AGTATAATCC TAGGATGCCA ACACTTCCTT ACGATGCTGG GCGCGACGGT TCTCATTCCT
CTAATTGTGA CGCCCGCCAT GGGAGCAACG GCCAAGCAAA CAGCCGAAGT CATTTCAACT
ATTTTTGTGG TCTCTGGTGT CAATACATTG ATCCAAACGA CTCTAGGTGA TCGACTGCCG
ATTGTGCAAG GTGGCAGCTT CAGCTACCTC CCTCCAACTT TCTCCGTCAT TTTCAATCCT
TCTCTGCAGG CCATTGTCGG CGACAATGAG CGCTTCCTTG AAACTATGCA GGTTTTGTCC
GGAGCCATTT TTGTGGTAGG GATTGTGCAA ATGGCGCTTG GGTACTCTGG AGCGATTGTA
CCCATCCTCA AGTACCTTTC GCCCGTTACC ATTGCACCCG TCATCACGGC TATCGGACTC
GGTCTCTATT CTGTCGGCTT CACCAATGTA TCTACCTGCT TTTCTGTTGG CCTCATTCAA
ATGTTGTTGT CAATTATTTT TTCGCAATAC TTGAAAAAGT TCCTTATTGG TGGCTATCCT
GTCTTCGCAC TCTTTCCCAT CATTCTGGCG ATCGCAATTA CCTGGAGCTT TGCCGCCATT
CTGACGGCGT CTGACGTTTG GGGTGAAGAA AGTGCTTGCC GGACTGACAG TACGCGTGAC
TTACTCGACG ATATGCCCTG GTTCCGCTTC CCGTACCCTG GACAGTGGGG TCCACTAAAA
TCAAGTCTTT CGCCATCGTG CCTATGCTGG GTGGAATGCT GGCTGGCATG ATCGAATCGG
TCGGTGACTG CTACAGCTGT GCTAAATTAT GTGGAGCACC CCCGCCAACT CCCGGAATTA
TCAGGTTCGT GACTTGTGAA GCTTTTTGAT CTATGCTCTT TGTTTGAGAT TTTTGCAACT
GATTGAATTC TGCTCCTTTT GCCTATATCT GCAGTCGCGG CCTAGCTGGT GAAGGTATAG
GTGTGGTGAT TTCAGGGTTG TTCGGAGCTG GAGCAGGAAC CACGAGCTAC TCGGAGAACA
TTGGTGCCAT TTCCTTGACC CGCGTCGGTT CCCGCGCTGT CGTCCAATGC GGTGCAGTTG
CGATGATTAT TGTTGGTCTA TTCAGTAAAG TGGCGGCTCT TTTTGCCAGT CTCCCATCGG
CCTTGGTTGG TGGTATTTAC TGCGTAGTGT TTGGGCTAAT CGTTGCGGTT GGTCTGTCAA
ACTTGCAGTA CGTTGATCTG AACAGTGAGA GAAACCTTTT TATTATCGGC TTTTCAATTT
TCAACAGTCT TTCCATTGCT GGTCCAGCGG GATACTTTGC GGGTCAAAGC GAGAATCCGT
TTGGAGATTC AAACGCTGGC GAAATCGCAC TGGCGTTGTT CAGCTCCCCG ATGATTATCG
CACTGATTGC GGCCTTTGTT CTGGACAACA CCATTCCCGG TACACCAAAG GAGCGCGGTT
TGCTTGCGTG GGCGCACGTC CGGGACGCCG ACGTCAACAA CGATCCAGAG TACGTCAAAG
TTTACTCGCT TCCTCTCTTC TTTGCCAAGC TCTTCAAGAA CTGCGGCTAT TTAGAGTACG
TCAGCCGTGG CCGTATGCCA AATCCTCCGG CGAATGGCTA TCAACCAGGA CATGGCGATA
TTGGAGAGCT TTGCTGCGGC GGCTGTTTTG GTGGGCCGCC TTCCTTGCAA GACGACGTGG
AAGAAGTGGC TCCTCAGGAT TCAGTAGTAG ACGAAGAAAA CATTGCAACC GAGGCTTGA
|
|---|
| Protein sequence | MATGNISSIT GVPLSLDVSD EGTSDDIDKS GNNFVYETHE DRAKANGMKY TVSDVPPLPL
SIILGCQHFL TMLGATVLIP LIVTPAMGAT AKQTAEVIST IFVVSGVNTL IQTTLGDRLP
IVQGGSFSYL PPTFSVIFNP SLQAIVGDNE RFLETMQVLS GAIFVVGIVQ MALGYSGAIV
PILKYLSPVT IAPVITAIGL GLYSVGFTNV STCFSVGLIQ MLLSIIFSQY LKKFLIGGYP
VFALFPIILA IAITWSFAAI LTASDVWGEE SACRTDMGST KIKSFAIVPM LGGMLAGMIE
SVGDCYSCAK LCGAPPPTPG IISRGLAGEG IGVVISGLFG AGAGTTSYSE NIGAISLTRV
GSRAVVQCGA VAMIIVGLFS KVAALFASLP SALVGGIYCV VFGLIVAVGL SNLQYVDLNS
ERNLFIIGFS IFNSLSIAGP AGYFAGQSEN PFGDSNAGEI ALALFSSPMI IALIAAFVLD
NTIPGTPKER GLLAWAHVRD ADVNNDPEYV KVYSLPLFFA KLFKNCGYLE YVSRGRMPNP
PANGYQPGHG DIGELCCGGC FGGPPSLQDD VEEVAPQDSV VDEENIATEA
|
|---|
| |