Gene PHATRDRAFT_31619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_31619 
Symbol 
ID7196284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp536715 
End bp537518 
Gene Length804 bp 
Protein Length267 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177104 
Protein GI219110705 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.947079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAATT CTGACAATCA TGCGGATATC ATAGAAGCTT GTGAGGGGGG TGTTTGTCGT 
CCGCGCGGAG TTGCAGACAA TGCACGTGCT TCCACTGCAA TCCCTACAGA AAGGGCAGAA
AGTACGGATA ACAAACTGTC CATTAAGATC GACATAATTA GTGATACGAT GTGTCCTTGG
TGTTTTGTGG GAAAGCGAAA TCTCGAAACT GCACTACGCA TGGTACCCGA GATCTCAGCA
GAGGTCAATT GGCTCCCCTT TTTCTTGGAC AAAAATCTTC CAGAAGAAGG CAAGCTCGTC
AAGGATTATT ACATACAAAA CTACGGGGAC CCAAACGCCG GAGAAAGAAT GATGCCCCAT
TTGATACAGG CTGGTAAAAA GAGCGGGATC GAATTTGGCT CTGCTTTTGT CGAAGCAGAA
CGCTTGTTCC CTACGATTCG ATCTCACCGC CTCATCGAAT ATGCAAAACG ACAAGGAAAG
CAGAATCAAA TGGTGGAAGA GCTTTTTCAC ATATACTATG AAGAAGGGAA ACGTTTAAAT
TCAGTTTCCG ACCTCGAAAA TGCTGCTAAT GCGGTGGGGC TCAACGGGGA TGTCAGAGCT
TATTTACTCA GTGACCAGGA TGAAAAAGAG GTATTTGAGA CAGCAGCCAA AATTAAAAAG
GATGCCAGTG GTGTTCCGAC GTTTTTGTTC TCGCGCTCTG ACCTTCCTGA AATGAAACCA
GTGTCCTTTA GCGGAGGACA GCCCCCGACA TCATTTCTGG CGATTTTTAA GCATCTGTCT
ACAGCTTCGG ATGACCATAG CTAA
 
Protein sequence
MTNSDNHADI IEACEGGVCR PRGVADNARA STAIPTERAE STDNKLSIKI DIISDTMCPW 
CFVGKRNLET ALRMVPEISA EVNWLPFFLD KNLPEEGKLV KDYYIQNYGD PNAGERMMPH
LIQAGKKSGI EFGSAFVEAE RLFPTIRSHR LIEYAKRQGK QNQMVEELFH IYYEEGKRLN
SVSDLENAAN AVGLNGDVRA YLLSDQDEKE VFETAAKIKK DASGVPTFLF SRSDLPEMKP
VSFSGGQPPT SFLAIFKHLS TASDDHS