Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_31619 |
Symbol | |
ID | 7196284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 536715 |
End bp | 537518 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177104 |
Protein GI | 219110705 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.947079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAATT CTGACAATCA TGCGGATATC ATAGAAGCTT GTGAGGGGGG TGTTTGTCGT CCGCGCGGAG TTGCAGACAA TGCACGTGCT TCCACTGCAA TCCCTACAGA AAGGGCAGAA AGTACGGATA ACAAACTGTC CATTAAGATC GACATAATTA GTGATACGAT GTGTCCTTGG TGTTTTGTGG GAAAGCGAAA TCTCGAAACT GCACTACGCA TGGTACCCGA GATCTCAGCA GAGGTCAATT GGCTCCCCTT TTTCTTGGAC AAAAATCTTC CAGAAGAAGG CAAGCTCGTC AAGGATTATT ACATACAAAA CTACGGGGAC CCAAACGCCG GAGAAAGAAT GATGCCCCAT TTGATACAGG CTGGTAAAAA GAGCGGGATC GAATTTGGCT CTGCTTTTGT CGAAGCAGAA CGCTTGTTCC CTACGATTCG ATCTCACCGC CTCATCGAAT ATGCAAAACG ACAAGGAAAG CAGAATCAAA TGGTGGAAGA GCTTTTTCAC ATATACTATG AAGAAGGGAA ACGTTTAAAT TCAGTTTCCG ACCTCGAAAA TGCTGCTAAT GCGGTGGGGC TCAACGGGGA TGTCAGAGCT TATTTACTCA GTGACCAGGA TGAAAAAGAG GTATTTGAGA CAGCAGCCAA AATTAAAAAG GATGCCAGTG GTGTTCCGAC GTTTTTGTTC TCGCGCTCTG ACCTTCCTGA AATGAAACCA GTGTCCTTTA GCGGAGGACA GCCCCCGACA TCATTTCTGG CGATTTTTAA GCATCTGTCT ACAGCTTCGG ATGACCATAG CTAA
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Protein sequence | MTNSDNHADI IEACEGGVCR PRGVADNARA STAIPTERAE STDNKLSIKI DIISDTMCPW CFVGKRNLET ALRMVPEISA EVNWLPFFLD KNLPEEGKLV KDYYIQNYGD PNAGERMMPH LIQAGKKSGI EFGSAFVEAE RLFPTIRSHR LIEYAKRQGK QNQMVEELFH IYYEEGKRLN SVSDLENAAN AVGLNGDVRA YLLSDQDEKE VFETAAKIKK DASGVPTFLF SRSDLPEMKP VSFSGGQPPT SFLAIFKHLS TASDDHS
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