| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_31584 |
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| Symbol | |
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| ID | 7195951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 433311 |
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| End bp | 435167 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002176585 |
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| Protein GI | 219109662 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000066135 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACAC TGATACTTTT GCCTGCCTCC GAGTTTGGTT TTGCGAAAGA TTACGCAGAA
GCACCGATTC AGGATGCATC TGCAACGAAC AATCGTGGAG ATTCGCCGCT TGAACAGCTG
GAGGAATCGG AGGGAGACCA AGTCTCGGTG CCGTCTTTGT GCCAAGAAGA CGAGGTGGAG
CTACAGCCAG CCAGGAACGA AGTTTATGCT GCTGCGGTCG ATGATGGTGA CGATGGCGAT
AGCGAGCACT GCGTGATCAG AGATGAGGAC CACCTCGACG TTGCCATGAT GGAGCCGACT
ACGCAGTTGC TGGAAGAAGC AAGTTCACCA TTAGCCATGG ACGAGGAGGC TGACGTACCA
ATCAGCATCA CGTACTCCAC AGACCCTGGT AGCGACACTG ACTTTGGCGG TTTGTTGAAC
CTTGGCAATA CGTGTTACAT GGCTTCGGCA CTACAAATGA TTGCCAGCCT AGAGTCATTC
GTGGACGAAT TGAAGACCAA AGTAGAAGAA ATACCGACAG ATTCTCAGTT GCAACGCTGT
TTAGTGGACC TATTCGACCA ACTCGCGAGA GGCAAATCAG TTCGGCCTGT CGTATTGAAG
GACACGGTCG ATACGCGCTC AAGCTTGTTT GTTGGATATG ATCAACAGGA CGCGCACGAG
TTTCTGACGA CCCTTTTGGG CATGCTTGAT GACGAATACA ATATCAAGAC GAAGACGACT
CGAAAAGTCA ATGAAAATCT TGTATCATAT GTCAATACAC CAGATGACGC CATGGACGAA
GATAATGATG GCGAAATGGA TGAAACAGAG CCAGTGGACA TGAATCTCTC GCTAACCGTA
AATGTCCCAA AAGGATCTGC CTTGGTTCCA CATTCCGTGG ATACAATAGA TCCTCCTTCT
CTGTTGTACA GCCGCCACGC CTTTTCCGAG TTGGATGTGG ATGAGATTCG CCATTTGTTG
CACGGGACTC CTACCAGTCG AGAGGGCATG TTGTTGCCCG CATATACTGC TGCAACTGAA
CCACGTTGCA AGCTCGTAGG CGGTCGAATG CATACAACTG ACATCCCTTG GACATCGTAC
GAGTCTCATT CCTTTGTTGG TAATCAAATG AAGGACAACG AATGTCTAAA TTCCCATCAT
TCACCGCTTC ATGCTTCTAC CGCCGCAACG TCGACAGCTG ACGATGCCGA TCATCTCACC
GCGGACGACG ACAAAGTGGT TTCTCCTGTG AATGATTTCT TTACAACTGT GGCTCGTGCG
CGGCTTACCT GCGATTCCTG CATGTATACG CGCACTCATC TCGAAACCTT TTTACACTTG
TCTCTCGAAA TCGGGAATGA CGTCACCGTT GAGGATAGCT TGCGTCGATT CTTTGCGCCC
GAGCCACGCG AACTCAAGTG CGAAAAGTGT TTTTGCGAAA GGGCCACTCA GACTACCGAG
ATCGTCAAGC TGCCACGAGC CTTGCTTTTG CATTTTAAAC GCTTTATCGT GGACGTGAGT
GATGATTGGG CTTCCGTTTC GTATCGCAAG AATCAGTCAG CCGTAGTCTT CGAAGACACC
CTGTCGTTGG ACAAAGACAT GGGTGTGCTT TCGGAATTCT TAGCGACCGA TTATTCATTA
CCAACCACAA GCGGAACCTC TTGTAGTTTG GGGAACAGGT ATGGGATTCG CAGCGTGGTA
AACCACATTG GGGCGTCGGC GAGTTGTGGG CATTATACGG CGGATGCGTA TCGAAGGAAA
GATGAGACGC GGAAGTGGAT GCGCTTCAAT GACGCCTTTG TTTCAAGTAT ATCGGAGAAG
CAGGCTTTGT TAGATTCACA AAAGACGGCC TACATGGTAT TGTACGAGTT GGAATAG
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| Protein sequence | MATLILLPAS EFGFAKDYAE APIQDASATN NRGDSPLEQL EESEGDQVSV PSLCQEDEVE
LQPARNEVYA AAVDDGDDGD SEHCVIRDED HLDVAMMEPT TQLLEEASSP LAMDEEADVP
ISITYSTDPG SDTDFGGLLN LGNTCYMASA LQMIASLESF VDELKTKVEE IPTDSQLQRC
LVDLFDQLAR GKSVRPVVLK DTVDTRSSLF VGYDQQDAHE FLTTLLGMLD DEYNIKTKTT
RKVNENLVSY VNTPDDAMDE DNDGEMDETE PVDMNLSLTV NVPKGSALVP HSVDTIDPPS
LLYSRHAFSE LDVDEIRHLL HGTPTSREGM LLPAYTAATE PRCKLVGGRM HTTDIPWTSY
ESHSFVGNQM KDNECLNSHH SPLHASTAAT STADDADHLT ADDDKVVSPV NDFFTTVARA
RLTCDSCMYT RTHLETFLHL SLEIGNDVTV EDSLRRFFAP EPRELKCEKC FCERATQTTE
IVKLPRALLL HFKRFIVDVS DDWASVSYRK NQSAVVFEDT LSLDKDMGVL SEFLATDYSL
PTTSGTSCSL GNRYGIRSVV NHIGASASCG HYTADAYRRK DETRKWMRFN DAFVSSISEK
QALLDSQKTA YMVLYELE
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