| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_31534 |
|---|
| Symbol | |
|---|
| ID | 7196075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | - |
|---|
| Start bp | 305976 |
|---|
| End bp | 306974 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177064 |
|---|
| Protein GI | 219110625 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000066537 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGTA AGTCCTCTCC CAAAGACCTC ATCGAGTCGT TCCCGCACAG CAAGCTCACG
CCCATCGCTA CCGCGACGAC CAAACCTGAT TACCTGTCGC TTCACCAGCT TCAGTGGGAA
ATCAACGACA ATGCTGAATC TCTTTCCTCC ACTCTTGGAG ACGGCCAACA CGGTCACCTT
TTTCTCGTCG TTTCCGAAAC CGAGTATCTC GCCATGACAG ACGGCGTCCC TTGCATTCCT
CCCGTGCAAC CGCCCTTGGA CCCCGACCAT GCCGCCAATG CCACTGCGCC TCAAATCCTT
GAAGCCAATC GCCAAAACGA CAAACGTCAA AAGCTCTTTG ACCTTTACCA TAACGCCAAC
AAGGCGTTTC GCAACCAACT TCTCGACGCC ATTCCCATCG AATACATCGA ATCTCTCGGT
CATCCCACGC GTGGTTTCAA CAAGGTCTCT CCTTTAGCCA TTCTCTCTCA TCTCTGGGAA
ACCTTTGGTA CAATTCAAGC GTCAGATCTC ATTGCGAACG ACAAACGCAT GAAAGCTGCC
TGGCATCCTC CCACGCCCAT TCAGCAACTT TTCCAGCAGC TCAAAAAAGG TAACCAGTTC
ATCATTGCGT CCGGCCAAAT CATGGACAAA CGCATTATTG CTCGCATCGG CTACCAGATC
ATCGAAAAAA CTGGCCTGTT TGATCACGCG TCTCGCGACT GGCGTTACAA GGACGAAGCC
GACAAAACTT TGGCCAACTT CAAAAAACAT TTTCAGAAGG CCAATAAAGA CCGCGCCCTC
ACCGCCACCA GCAGTTCTGC CGGCTATCAT ACCGCAAATC AAGGTACAGT CAGCAAAGGT
AAATCGTACT GCTGGACTCA CGGCATTGTC AACAACACGA AACACACAAG TGCGACGTGT
GAGAAACAAG CCCCTGGTCA CCAGATCACG GCCACCATGC AGAACAAACA AGGTGGTTTG
ACTTCGGCTT ACCAGTACAC TCCTCCGGCG ACCAAATAG
|
|---|
| Protein sequence | MISKSSPKDL IESFPHSKLT PIATATTKPD YLSLHQLQWE INDNAESLSS TLGDGQHGHL
FLVVSETEYL AMTDGVPCIP PVQPPLDPDH AANATAPQIL EANRQNDKRQ KLFDLYHNAN
KAFRNQLLDA IPIEYIESLG HPTRGFNKVS PLAILSHLWE TFGTIQASDL IANDKRMKAA
WHPPTPIQQL FQQLKKGNQF IIASGQIMDK RIIARIGYQI IEKTGLFDHA SRDWRYKDEA
DKTLANFKKH FQKANKDRAL TATSSSAGYH TANQGTVSKG KSYCWTHGIV NNTKHTSATC
EKQAPGHQIT ATMQNKQGGL TSAYQYTPPA TK
|
|---|
| |