Gene PHATRDRAFT_31525 details

Gene Information

• Locus tag: PHATRDRAFT_31525
• ID: 7196692
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: -
• Start bp: 284490
• End bp: 287886
• Gene Length: 3397 bp
• Protein Length: 1104 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002177057
• Protein GI: 219110611

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACATTGT CAAACTACCC CCGCCATCCG TCGCCGCTGG GTGGATTGAT GGTGCCTAAA 
TTCAACACAA TGGTTTTGTA TTGTACAATT TTAGTCATAT TTATTGCGCT GAATATTGTT 
TTGGCGGGGA AGGGGCCGGT TTCGCAACGA CGCGTCGCGT CCTCGGCGCC TCTTTTTCAA 
TTTGACTTGC AACCGACAGG ATTTCTAAAA GAGGCTCGTC AACGCCGCAG ACTACAGAGC 
AACTCGTCTT TCGTCATACC GGATGAATGG CTGCGACCGG AACGAAGTGC CGTTTATGCC 
GGTATTCCTG ATGCCCGTGA TCCACGTTAC CGACACAACC GTCAATTGCA AGAGTTTCAT 
GACCTCCGAC ACTTGAGTCG ATACGAGCAG GCTTATCGGA CCCAAAATAA TATTGATTTA 
CGAGAAAAAT GGGATGAAGA ATACTCTTTT GAAGACGAAC AAAAGGAGAT TCCCAAAAGC 
GCAGAGCTTC GCAACCAGAC TGCAGAAAAT CGATTGCGTT CACACTCCGA CAAAAGGAGA 
AGGACACAGG AGGCTGCTCC CGTTGCTGGT GGACAATACA ACAATTATCA GGCCGTACCC 
TTGGCACAAG GCTATGGAAC GCACTACGTT AATGTCTGGG TGGGATCTCC CTTTCCGCAA 
CGAAAGACGG TCATCGTCGA TACCGGCTCG CACTACACTG CTTTTCCCTG TAATGGATGT 
CAAAATTGCG GTTCGACGCA TCATACCGAT CCTTACTTTG AACCAAAAAA GAGTGCATCG 
TTTCATCAAC TCCAGTGTGA CGAATGCCGG GATGGTATCA CATGTCAAGA CGGGGAGTGT 
AGGTTCAGCC AGTCCTATAC GGAAGGCAGC TCATGGGACG CCGTACAAGT TTTAGATCGA 
TTCTATTGCA GTGGTTCCGA TATTATCGAC TCCGTTTCTT TAGAAGACCA ACGAAACTCA 
ATCGACTTTA TGTTTGGATG TCAAAAGAGT ATGACTGGCT TGTTCATTAC GCAGCTTGCG 
GATGGAATAA TGGGAATGTC AGCACACCAG GCGACCTTAC CGAAACAGTT GTACGACAGA 
CACATGATTG AACACAATAT TTTCTCCATG TGTTATCGTC GAGAGCTGGG CACAAGCAAG 
CGTGGTGTCA TGGCAGGTAG TATGACAATT GGAGGAATAT CCACCAACCT CGATACCAGC 
CCCATGGTGT ATGCCAAGAA CATGGCCAAA ATTGGATGGT ATACAGTCTA CGTCAAGAAC 
ATTTATATTA GACAAGGAGG CGGACAATCT GCCAAGAGTG TGGATCCTGA TCACCGTACG 
ATCAAAGTAA AGATGAATCC TGCTGTTCTT AATAGTGGTA AAGGTGTCAT TGTGGATTCG 
GGAACAACCG ATACTTACCT CAACAAAGAT GTAGCTCCGG AGTTTAATAT GGCTTGGCGT 
CAGGCAACTG GTCAGTCGTA CTCTCATCTA CCGATGAGAC TCTCGCCGGA ACAAATTCTG 
GAGCTGCCTA CTGTTCTCGT GCAATGTCAT GCCTACAGAG AAAATTTGGA TCCGTCAATC 
GAGGGTTATG AAGATATTCC TGGGTACGCT GGTCGTTTGG ACCCATCGTC CCCCAATGAT 
TTGCTCATTG CGATTCCAGC CACCAGCTAC ATGGACTTTT CTCCGATCAC GTCCATGTAC 
ACCAGCCGAA TCTATTTCAG TGAAACATCT GGCGGAGTCT TGGGAAGTAA CACTATGCAA 
GGGCACAACG TTGTCTTCGA CTGGGAAAAC GGCCGTGTTG GGTTTGCAGA GAGTTCTTGC 
ACGTACGACA AGAAATCCGT GCCGGAAGTT GCACAGGATA ACGGATACTC AAAGGACTGC 
ACAGTGCACG CTCCAATTCT ATCTACGCCA TGTATTGATA CCGTGCACCG GGAAATTTGC 
GAACACGCCT CCTCGAATAT TGCTCTCCTG GGCAACGAAA CTTGGACTGG TATTGTCGAG 
AGTGCTGGCA GCAAAGAGGG TGTTCAGTGT ACTGAAGTAG CAAGAGAATC TTCATCAAAG 
AGTGTGTTCC AGAACTCTGA CGTTGACTGC AATGGCAAGG GAACTTGCGA AGAGAAGAGA 
TCGTGTCAAC TTACATGCGC CGAAGCCATA GTAGCTGCGA ATGTGTCAAA AGCGCCTATT 
TCTGAAAGCA TCAGATATGA CTGCGGAGAT TCTTTGTGGA GCACATGCGA TCATGGGTGC 
GAGCAGACTC GGATTGTATC AGCCGCTCAT ACAGACGGAA TCTGCCACGA AGAGCACAGA 
TTCTCCCGAC CTTGCCATAT CGAAGCTTGC GCCCGTTCAG ACCCTTGTCT TGTCCCATTT 
CTCATTCATA CAGTTGTTGG CCTTCAGGGA ATATCGGTTT CAAAATGGAC AGGATCCTCG 
GAAAATACTT TTGTTTCAGC TCTGACAAGT GTGGCACGTG CACTTAATCC ATTAGAAACA 
TTTGGCGAAG GTGATGTGAA TGTGCTGCTA GCTATTCCAT GGCATGTGGA CGAAGACGAT 
CCAGACCAAG GTACTCATGT ATCCAAACCT ATTGGAACAA AAATTATTCT GGAGATTTCA 
ATTTTTAACA ACCTTTCCAA TGCTACATCC ACTGTAACCA GCGATACAGA CGATTCATCC 
GTCAAAGGAA TACTGTGGAA TATTACCGAG CGCATAAAGA CGCGGCTACC CGATACGATC 
TGCAACTCGG ATGATATGTA CACGCTTGCA AAGAAAACTC TCTCCATAAA AAAGCGTGTC 
TTAGAAAGTC AGCTTTTCAT TGGTTCGCTT ATTCACGAAA TGGAGAGAAT AGAATTATCA 
GACCCAATCT CAGCGGCAAT TTCGATGTTT TCGCCACTTT TCCATACAGT TTCCCTGGAG 
AGCGAGAATG AAAGCCGAGT TGTATCTTCT TGGACGATCC AGACAACGAT CGATGATCAG 
ATCAACTACT TCGTAAGTGA AGCAATAGAA AAAGTCTTTG CTGAGTGCAA TGACATCAAC 
CTCACTGCAG TCAACTTGAC ATTTTCCCAA ATAGGGACCG CCCAGGCCAA TTTGGCATAC 
AATGTTAAGC TTCATTCATG TCGTGTTGTT GACGATGATC TTTTTTTTAA TCCTGACATC 
AGCTTGGACA CTGCTCGTGT CTATGTATGA ATATCTACTG GAGCGCGGTT GGTTTCTACG 
AGTAAGGAAA GGCCGACATC GATATTCTCC AGCTAAGGCC TGTGACGACT CACAGACAGC 
TGATCAGGAG CTCGAACTGG CGGATGGCGG TAATCTGGAA ATGACGGTAC AAAACACTGA 
TTTTCAAAGC CGAGGCGGAA CTAAAGCCAT CAAGCGAAAG ACATCTCCAG CCGATCGTGA 
AGGCACGATT GTGAAGAATA TTTCGAGAAC GACCTAG 

 

Protein sequence

MTLSNYPRHP SPLGGLMVPK FNTMVLYCTI LVIFIALNIV LAGKGPVSQR RVASSAPLFQ 
FDLQPTGFLK EARQRRRLQS NSSFVIPDEW LRPERSAVYA GIPDARDPRY RHNRQLQEFH 
DLRHLSRYEQ AYRTQNNIDL REKWDEEYSF EDEQKEIPKS AELRNQTAEN RLRSHSDKRR 
RTQEAAPVAG GQYNNYQAVP LAQGYGTHYV NVWVGSPFPQ RKTVIVDTGS HYTAFPCNGC 
QNCGSTHHTD PYFEPKKSAS FHQLQCDECR DGITCQDGEC RFSQSYTEGS SWDAVQVLDR 
FYCSGSDIID SVSLEDQRNS IDFMFGCQKS MTGLFITQLA DGIMGMSAHQ ATLPKQLYDR 
HMIEHNIFSM CYRRELGTSK RGVMAGSMTI GGISTNLDTS PMVYAKNMAK IGWYTVYVKN 
IYIRQGGGQS AKSVDPDHRT IKVKMNPAVL NSGKGVIVDS GTTDTYLNKD VAPEFNMAWR 
QATGQSYSHL PMRLSPEQIL ELPTVLVQCH AYRENLDPSI EGYEDIPGYA GRLDPSSPND 
LLIAIPATSY MDFSPITSMY TSRIYFSETS GGVLGSNTMQ GHNVVFDWEN GRVGFAESSC 
TYDKKSVPEV AQDNGYSKDC TVHAPILSTP CIDTVHREIC EHASSNIALL GNETWTGIVE 
SAGSKEGVQC TEVARESSSK SVFQNSDVDC NGKGTCEEKR SCQLTCAEAI VAANVSKAPI 
SESIRYDCGD SLWSTCDHGC EQTRIVSAAH TDGICHEEHR FSRPCHIEAC ARSDPCLVPF 
LIHTVVGLQG ISVSKWTGSS ENTFVSALTS VARALNPLET FGEGDVNVLL AIPWHVDEDD 
PDQGTHVSKP IGTKIILEIS IFNNLSNATS TVTSDTDDSS VKGILWNITE RIKTRLPDTI 
CNSDDMYTLA KKTLSIKKRV LESQLFIGSL IHEMERIELS DPISAAISMF SPLFHTVSLE 
SENESRVVSS WTIQTTIDDQ INYFGPPRPI WHTMLSFIHV VLLTMIFFLI LTSAWTLLVS 
MYEYLLERGW FLRVRKGRHR YSPAKACDDS QTADQELELA DGGNLEMTVQ NTDFQSRGGT 
KAIKRKTSPA DREGTIVKNI SRTT