| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_31494 |
|---|
| Symbol | |
|---|
| ID | 7196053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | - |
|---|
| Start bp | 210118 |
|---|
| End bp | 210783 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177042 |
|---|
| Protein GI | 219110581 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.660597 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACA CGGCCGTAAT CCACGATGAT CCGAGTGGCA CGAACAACGA TGACGACGCT
GTCACTGAGC ACGGTGACAG TGGTATCAGC CACCTTCCCA AGAAAGAAGC ACCTGATGGC
AAGATATATT TCAGCTACTC CGAAATTCAC GCCACCATCA CTTCTCTCGT TCCTCAGCTC
GAAGCATTCC AACCCACACT CATGATTGCG ATTGGCGGCG GCGGATTCAT TCCAGCACGG
ATACTGCGGA CGCAGCTTAA AGTGCCCATT GTGGCTGTTA GTCTCGAGCT GTATGATGAC
AATACTAATT CTATTCGTGA AACGGGCGTC CAGTGTTTGC AATGGTTCGA CGTGTCCGAA
AAACCGGGCT CGTTCGCCCA GAACGGCAAC GTCCTCATCG TGGATGAAGT AGACGACAGC
CGAACCACGC TACAATTTTG CGTCGAACAA GTCTTACAGC GGTGTTCACC GAAACGTATT
GCCGTCGCGG TCGTTCACAA CAAGCTCAAG GTCAAAAAAG GCGTCCTACC GAGCCATGTG
GAGTACTTTG CCGGCGCCGA CGTCCCCGAC AAATGGAACT GCTATCCATG GGACGCAGCC
GCCTACGGAC GGGATATTGA AACACACGAA GCGCTATCTC GTGAATGCTC CGGTCTACCC
AAGTAG
|
|---|
| Protein sequence | MTDTAVIHDD PSGTNNDDDA VTEHGDSGIS HLPKKEAPDG KIYFSYSEIH ATITSLVPQL
EAFQPTLMIA IGGGGFIPAR ILRTQLKVPI VAVSLELYDD NTNSIRETGV QCLQWFDVSE
KPGSFAQNGN VLIVDEVDDS RTTLQFCVEQ VLQRCSPKRI AVAVVHNKLK VKKGVLPSHV
EYFAGADVPD KWNCYPWDAA AYGRDIETHE ALSRECSGLP K
|
|---|
| |