Gene PHATRDRAFT_31433 details

Gene Information

• Locus tag: PHATRDRAFT_31433
• ID: 7196649
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: -
• Start bp: 87697
• End bp: 89869
• Gene Length: 2173 bp
• Protein Length: 641 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002177013
• Protein GI: 219110523

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00201267
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGACG TTGAATCCGG AGACGGTACC GGGAACTACG GCAACGAAAT CGCGGACGAC 
AGTAACAATA ATAACCCTCG GGTACTGGAT CGCGACGACA GCGAGCTCGA CAAGCATGAT 
GATCCCTTTG CTCCACGCGA AGGCAAAACC CTCACCTGGA CTAACATTCA CATGACCTTG 
GTACGTGCGA ACGACGATGT AAAGGTTTTG TTGTGTATCG TTCTGCCGTA GCGCATCGTT 
GTTCGATCGT CCTCGCTCGC ATTCTCATCG TCATTGTCGT CGCCGCTATC CCCCACATAT 
AGGCTGGAAA GGGTGAGGAG TCCGAACGCA AACTTCTCGA TAACGTGTGG GGCGAGGTAC 
CGGAGAAGCA AACGACGGCG GTCATGGGTC CTTCCGGAGC CGGCAAAACG TCGCTTTTGA 
ATATTCTCGC CGGTCGCGCC AGTTCGCACG GACGCGTCAA GATCGAAAGC GACGTTCGTC 
TCAACAACTA TTCCGTCGAT CCGACCAACA TCAAGGTCCG CAAGCTGATT GCCTTTGTTG 
CGCAGGACGA TTCCTTGCAG GTCACTTCGA CGCCCCGGGA GGCCATTCGC TTTTCCGCCA 
AGTTGCGTCT ACCCAGAGCT ACGACAGATC ACCAGCTCGA CAAACTCACC GACCGCATGA 
TCACCGAACT AGGACTCACG GCCTGTGCCG ATTCCATTGT CGGAGGGGAA CTCATCAAGG 
GAATTTCCGG AGGAGAACGT AAGCGTACTT CGGTCGGGGT CGAACTCGTC GTCAAGCCTG 
CCTTGGTCTT TCTCGACGAG CCTACCAGTG GTTTGGATTC CTTCAGTGCC GTGCAGTTAT 
GTCAGGTTCT CAAAAAGGTA GCCAACGCCG GATCGTCCGT TTTCTTTACG ATCCATCAGC 
CTTCTTCGGA AATCTTCAAT TCCTTCGACC ATTTGATCCT CATGAACAAG GGACGCGTCA 
TGTACACCGG CTCGGTCCAC GGAGTGCCGG ACTTCTTTGC CTCTCGAGGA CATCCCAATC 
CTCCCAACTA CAATCCGGCC GATTTCATCA TGAACGTTGC ACAGTCGGTG CCCGTCAAGC 
AACTCAACGA GGATGGATTC TTCCCCACCG ACGAACGCAA AATGGGGGAA GCCTTTGTTC 
CGGATGACGG AAAGGATGCT CTCGGGATTA CCGTTACCCG TCGCACTGCT CGTGGTGTTG 
ACGTGTACGA CACCAAACCC CCCGGTCTCG TGACGCAGGT CAAGCTGCTC TTTACTCGTG 
AAATTAACAA CTTGCGTCGG GATGTTACGG CTCTTGGTGC CCGCTTTGGC CTCACCATCT 
TTTTGGGAGT CTTGGTTGGT ATCATCTTTT TGGATGTGGG CAAGACTGAT CCCACTGTCG 
CGGTCAATCT GCAGTCCCAC TTTGGTGCCC TCATTATGGT CCTCCTTATG AGCATGTTCG 
GGACCGCCCA ACCCGCCCTG TTGTCCTTTC CCGAAGAACG CCCCGTCTTT TTGCGCGAGT 
ATTCCACCAA TCACTATTCG GTCATTTCTT ACTTTTTATC GCGATTGACC ATGGAAGCCG 
TGGTGACTGG ACTTCAGGTA TTTGTGCAGG CCATTATCAC GTACTTTATG ATCGGCTTTC 
AACTGTCCTT TGGTTTGTTT TGGGCCGTTA CGTACTCTCT CGCCATGGCC AGTACGGCGT 
TGGCCGTGTT GCTGGGTTGT TCCGTGGAGG ATCCCAAACT AGCACAGGAA ATGTTGCCGA 
TTTTGTTTGT GCCGCAGATG CTCTTTGCCG GCTTCTTTGT CGTGCCTGAT TTGATTCGTA 
AGTGGTCGGT GTTGAGCTGT GCAAAGATGG CGGTCCCGCC CTGTCTGTAC CGACCGATTT 
TTGGAACCAC CGTGTGATGC GTTTCTCACA CGACAAATTC ATTTCTCATA TTTATGCTAC 
AGCTGTCTGG TTGCGCTGGG CTCGTTACCT TTGTACCTTG ACCTACGCCA TTCGCATTCT 
CTTGGTGGAA GAATTCTACG ATTGCGATCC TGGTAATCCA GAAGCCAACA ATGCTTGCAA 
CGACTTGGTC TCGAACATTG ACGCCGACCC GGACGAGACG TGGTGGAATT GGTTGGTGCT 
CGTAGCGCTG TTCGGGGTCG CCCGTATTTT TGCTCTCTAT ATTCTCCGTC AAAAGTCCAC 
CAAATTCTTT TAA 

 

Protein sequence

MEDVESGDGT GNYGNEIADD SNNNNPRVLD RDDSELDKHD DPFAPREGKT LTWTNIHMTL 
AGKGEESERK LLDNVWGEVP EKQTTAVMGP SGAGKTSLLN ILAGRASSHG RVKIESDVRL 
NNYSVDPTNI KVRKLIAFVA QDDSLQVTST PREAIRFSAK LRLPRATTDH QLDKLTDRMI 
TELGLTACAD SIVGGELIKG ISGGERKRTS VGVELVVKPA LVFLDEPTSG LDSFSAVQLC 
QVLKKVANAG SSVFFTIHQP SSEIFNSFDH LILMNKGRVM YTGSVHGVPD FFASRGHPNP 
PNYNPADFIM NVAQSVPVKQ LNEDGFFPTD ERKMGEAFVP DDGKDALGIT VTRRTARGVD 
VYDTKPPGLV TQVKLLFTRE INNLRRDVTA LGARFGLTIF LGVLVGIIFL DVGKTDPTVA 
VNLQSHFGAL IMVLLMSMFG TAQPALLSFP EERPVFLREY STNHYSVISY FLSRLTMEAV 
VTGLQVFVQA IITYFMIGFQ LSFGLFWAVT YSLAMASTAL AVLLGCSVED PKLAQEMLPI 
LFVPQMLFAG FFVVPDLIPV WLRWARYLCT LTYAIRILLV EEFYDCDPGN PEANNACNDL 
VSNIDADPDE TWWNWLVLVA LFGVARIFAL YILRQKSTKF F