| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_31431 |
|---|
| Symbol | |
|---|
| ID | 7196629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | + |
|---|
| Start bp | 83699 |
|---|
| End bp | 84823 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002176515 |
|---|
| Protein GI | 219109521 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.814244 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAAG GGGATTCCCG CCGAAAGATT GGTGCTCAGG TGACAGCGAA GGCCTGTCAT
GTTGTCCATT TGAGTGAGTG TGCTCGGCGA TACGGTGCTT TGAGGACCAC CAAGGTTGTT
GTGGGGACTG TTGTGGAGGT CAACAATACC AGAAAGGCGC CAAACAACCG TGTATCAACC
TTCATTACTG CTGACTTTGA TATTGGCGGA GGATCAGTCA AGCGGAGCAC TCTGAACATC
CGTAGCGTCA AACTCTTCAA ACCGGACCAG TCGACAGTAC CATCCAGTCC CGCAGCACCA
ATACCGGCAG TAGACAACGC AGACACAGAT TTGGCCGTTC CAGAGCAAGA GGAAGGAGAA
GCGGTCTTGC AGGAGACTTC TCCTGATGAA GAATTGGAAT TTCCAGCACA ACCGATGATG
GAAATTGGAA TAGCTGCGGG GGAACAGGTA GCAGGACCTA CCGCACAAGT AGCCATGCAG
GTTTGGGGTG TTGAAGACGC TTCCTTTGTA ATGGCTCATG AAACAAAGTG GTATGCTGAC
AAGCAAGCTA CATTGATTGA TATAAATGGC AGTGTCCAAA GTAAGCAGTT TGGCATCAAT
ACACCAATTG GCGACCTTCT TGGTCCAGAC TCTGACATTG ATGGAAAATA TTCGCGGCTG
CAATATTTTC TTCTCATGTT TCCACCCGAC CAACTGAGCG CCATGTGTCA GCTAACAAAT
GTGCAGCTTG TCCAACAGAA CAAGCACTGC ATGTCAACAG GAGAGCTGCT TCGATTCTTT
GGCATTCTAA TTCTTGCGAC AAAATTTGAA TTTAGCAGTC GATCGCAATT GTGGTCCACA
ACCGCGCCGT CAAAATACAT TCCTGCCCCT GCATTCGGAA AAACAGGAAT GTCGCGGCAG
CGCTTTGATG ATCTTTGGCG AAATATCCGA TGGAGCAACC AGTGTCCTGA ACGGCCGGAA
GGTATGAGCT CCCATACGTT TCGGTGGCAA CTTGTTGATG ATTTTGTTGA AAGATACAAC
AATCATCGAG CCAATACTTT CAAACCATCT CATCTTATTT GTGTGGATGA ATCAATGTCG
CGATGGTATG GACAAGGGGG GGGGGGGGGG GGGGGGAATG GATAA
|
|---|
| Protein sequence | MSEGDSRRKI GAQVTAKACH VVHLSECARR YGALRTTKVV VGTVVEVNNT RKAPNNRVST
FITADFDIGG GSVKRSTLNI RSVKLFKPDQ STVPSSPAAP IPAVDNADTD LAVPEQEEGE
AVLQETSPDE ELEFPAQPMM EIGIAAGEQV AGPTAQVAMQ VWGVEDASFV MAHETKWYAD
KQATLIDING SVQSKQFGIN TPIGDLLGPD SDIDGKYSRL QYFLLMFPPD QLSAMCQLTN
VQLVQQNKHC MSTGELLRFF GILILATKFE FSSRSQLWST TAPSKYIPAP AFGKTGMSRQ
RFDDLWRNIR WSNQCPERPE GMSSHTFRWQ LVDDFVERYN NHRANTFKPS HLICVDESMS
RWYGQGGGGG GGNG
|
|---|
| |