Gene PHATRDRAFT_3062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_3062 
Symbolmyst 
ID7196255 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp388740 
End bp390156 
Gene Length1417 bp 
Protein Length349 aa 
Translation table 
GC content45% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176575 
Protein GI219109641 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0291461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TACTACGTGC ACTACAAAGA CTTTAATCGA CGGATGGACG AATGGATCAG CGTAGATCGC 
ATCGTGTCGC CTCCCTCAGT TGGCAACGCC AAAGCTCGGG CACTAAAAAA AGAAGAGGAA
CGAGAGAAGA AAAAGAAGCA GAAAAAGGAA GAAGAAGAAA AGGCGCTTAT GGATTGGACA
CAACCTCGAA GTCGAAGGCG CGCTTCGGCT GTGGACATTA GCAAGGACGA TATGAATGGG
CGCAGAAGAC GTCTGTCTCG TAAAAAGAGC TTCAACACGG ACGATGACAA CACTGTTGTC
GCGTCGAACG TTGAAGAAGA CGACGAAGAA TATCAAGATG AGAAAGAGAA GTCCAATGAA
GAGATGTTGG CACTACCGAC GGATACTGTG ACCACGCACA CAGTAGGGGA GCATGTCGTA
GCGACGGTCA AAGCCCAGGA ACTTGATGAA CATGAAGGCT TGGATGAGGC GTCGTTGCGC
GAGCATGAAG AGGTAACGAA GGTGAAAAAT GTTGGTTTCA TGGAGCTTGG GCAATAGTAA
GTAATGCTTC GCTTTACGAC CTTGTTGGTG ACTGTCATAC TGTCTCTTTC TTCTTGTGAC
TCAATAATCG TTTAGTCAAA TGGAGACCTG GTATTTTTCT CCCTTGCCAA AAGAGCTATT
GAATGCAAGC GGCTTTATCG ACGTTCTGTA TGTTTGCGAG TTTTCCTTTG GGCTGTATGC
CCGCAAGAGT GAGCTTCAAA GGTTCCAAGC ACGTCTTCCG AGTGAAAGGC GCCATCCACC
TGGCAACGAA ATCTATCGAA ATGGCGATTT GGCAATGTTT GAAGTAGATG GAATGGAAGA
GCGAATCTAC TGTCAAAATC TATGCTATCT CGCAAAACTC TTCCTTGATC ACAAGACGCT
TTACTATGAT GTGGACCCTT TTCTGTTTTA CGTTCTGTGT GAAGTGGACA ATCGAGGCTT
TCATCCTGTT GGCTACTATA GCAAAGAAAA GTACTCCGAT GTTGGCTACA ATTTGGCTTG
TATTTTAACT TTTCCTGCGC ATCAACGCAA AGGGTATGGA CGCTTTCTCA TTGCTTTTTC
GTATGAACTT AGCAAAAAGG AAGAGAAGGT TGGATCACCA GAAAAGCCTA TGTCAGACCT
CGGGCAGCAA GCCTATAAGC CCTACTGGGG TTCAACGGTG GTTGATTATT TGTTGAATCA
GTCCAATGAA TCTTCGTTGA GCATTATGGA CGTTTCGAAA AGGACATCAA TCATGGCCGA
AGACATTGTT TTTACGTTGA ATCAACTAGG GATTTTGAAG ATCATCAACG GTATATACTT
TATCGCAGCC GAAAAGAGCC TGCTTCAGCG ATTGGCAGAA AAATACCCCG TAAAGGAACC
TCGAGTGGAT CCATCCAAGC TTCATTGGAC TCCCTTT
 
Protein sequence
YYVHYKDFNR RMDEWISKEK SNEEMLALPT DTVTTHTVGE HVVATVKAQE LDEHEGLDEA 
SLREHEEVTK VKNVGFMELG QYQMETWYFS PLPKELLNAS GFIDVLYVCE FSFGLYARKS
ELQRFQARLP SERRHPPGNE IYRNGDLAMF EVDGMEERIY CQNLCYLAKL FLDHKTLYYD
VDPFLFYVLC EVDNRGFHPV GYYSKEKYSD VGYNLACILT FPAHQRKGYG RFLIAFSYEL
SKKEEKVGSP EKPMSDLGQQ AYKPYWGSTV VDYLLNQSNE SSLSIMDVSK RTSIMAEDIV
FTLNQLGILK IINGIYFIAA EKSLLQRLAE KYPVKEPRVD PSKLHWTPF