Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_24886 |
Symbol | |
ID | 7196832 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | + |
Start bp | 1834603 |
End bp | 1836036 |
Gene Length | 1434 bp |
Protein Length | 200 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002176855 |
Protein GI | 219110207 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.845597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAATTCACTT CACAAATCGA AGATTGTGAA GGATTATAAT CAAAACATAT CGAAACCATG GCGCCCAACG ACTACAGTGA TGAGCTTGAG AGCGAAGAAG AGGACGAAGT TGAAGAAGAA GTCGAGGAAC CTGTGAAGAA AAAGCGTTCC GCCAAGAAGT GGAAGGTGTG TATTGGATTC AGAGAACCAT TTTGGCGACG ACGGTCGATA AGAATGGATC AGCCTCCTCT AACTCTTGTT ATGCAAATGC TATCATTAGG ACCCCAACAA ACCGAAGCGT GCCATGAGCG CATTCTTCTT GTTCTCTCAA GGTAACCGCG TGAACGTAAA GGAGGAGTTC CCTGAGGCTT CCTTCGGAGA AGTGGTAAGT CATTTTGGAG ATATCCTTAG TCAGCGAAAG TTGTTCATGG CGTTTTCAGC GCTCTTTATT GTGTTTTTGG AGTTTATAGA TTGGATTTCG TGCCATGGTG TCGATGTTGC GAGTCATGAG TGATGGGGAC CCTACGTGTG TAGTTGTGTG CAAAGATAGT GCACCAACAA GTCGCCGTAC ATCGCGAGAT CACCACGGTC AAAGCGCTCA ACACGAAGCA TCGCGATAGC AACAAAACGC ACTGTTTCTT GGCAAAAAAC TGTTATCCCT TGCAAATGTG TCACGTTGAT TCCAGTACAT TTTCTACGTC TCTTCTCTCA AGTGGAAAGT CTACCCAATC GGCGACAGCG GCACGTTCCA TGCCAGTCCT TGTTCGTATT ACCTTGTTCG TCTGTCTGTG AATCCTTGTC TTTTGTGACT TGTCTGTGCC AATCATTTGA CTTCACTTTT ATCGCGTTTG GTCGTTTGTG CTTTCATCGA TCTTTCATTT TTATACTGGA TTCTCACGTA GATTCATGTT TGTGACATTA GGCCCGAATT CTCGCGCGAA AGTACAAGGA GCTTACTGAA AAGGAGATGC GCAAATGGGA AAAGAAAGCC GAACAGGACA AGATCCGTTA CCAAGAGGAA ATGAAGCACT ACGTGCCGGC CGAAGATCCC ACCGGCGGCG GTAAGCGCAA GAAGGCCAAG AAGGACCCTA ATGCACCCAA GCGAAACATG TCGGCGTACT TCTTGTACTC CATTGAAGTC CGTCCCACCG TCAAGGCGGA CAACCCCGAA GCCACCTTTG GAGGAATTGC CCGGCTGATC TCAGAAAAGT TCAAGGCCTT AAGCCCCAAG GAGCGTAAGG TGTGGGATGA CAAAGCGATA GCTGATAAAG AGCGTTACAC CTCTGAAATG GAGATCTACA AGGAGGGATA AGCGTGGGGA CGCTGTTATT CGCAGGCCGA TTGTATTTGT TTTACGAAAA AGGATATTTC ACAATATAGT ATACCATCAA GTATTCCAAC ACGCCCATCT TCATGTCTAT ATACTATTAG TAATTATGGA GATTAAACCT CGTC
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Protein sequence | MAPNDYSDEL ESEEEDEVEE EVEEPVKKKR SAKKWKDPNK PKRAMSAFFL FSQGNRVNVK EEFPEASFGE VARILARKYK ELTEKEMRKW EKKAEQDKIR YQEEMKHYVP AEDPTGGGKR KKAKKDPNAP KRNMSAYFLY SIEVRPTVKA DNPEATFGGI ARLISEKFKA LSPKERKVWD DKAIADKERY TSEMEIYKEG
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