Gene PHATRDRAFT_24886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_24886 
Symbol 
ID7196832 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp1834603 
End bp1836036 
Gene Length1434 bp 
Protein Length200 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176855 
Protein GI219110207 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.845597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAATTCACTT CACAAATCGA AGATTGTGAA GGATTATAAT CAAAACATAT CGAAACCATG 
GCGCCCAACG ACTACAGTGA TGAGCTTGAG AGCGAAGAAG AGGACGAAGT TGAAGAAGAA
GTCGAGGAAC CTGTGAAGAA AAAGCGTTCC GCCAAGAAGT GGAAGGTGTG TATTGGATTC
AGAGAACCAT TTTGGCGACG ACGGTCGATA AGAATGGATC AGCCTCCTCT AACTCTTGTT
ATGCAAATGC TATCATTAGG ACCCCAACAA ACCGAAGCGT GCCATGAGCG CATTCTTCTT
GTTCTCTCAA GGTAACCGCG TGAACGTAAA GGAGGAGTTC CCTGAGGCTT CCTTCGGAGA
AGTGGTAAGT CATTTTGGAG ATATCCTTAG TCAGCGAAAG TTGTTCATGG CGTTTTCAGC
GCTCTTTATT GTGTTTTTGG AGTTTATAGA TTGGATTTCG TGCCATGGTG TCGATGTTGC
GAGTCATGAG TGATGGGGAC CCTACGTGTG TAGTTGTGTG CAAAGATAGT GCACCAACAA
GTCGCCGTAC ATCGCGAGAT CACCACGGTC AAAGCGCTCA ACACGAAGCA TCGCGATAGC
AACAAAACGC ACTGTTTCTT GGCAAAAAAC TGTTATCCCT TGCAAATGTG TCACGTTGAT
TCCAGTACAT TTTCTACGTC TCTTCTCTCA AGTGGAAAGT CTACCCAATC GGCGACAGCG
GCACGTTCCA TGCCAGTCCT TGTTCGTATT ACCTTGTTCG TCTGTCTGTG AATCCTTGTC
TTTTGTGACT TGTCTGTGCC AATCATTTGA CTTCACTTTT ATCGCGTTTG GTCGTTTGTG
CTTTCATCGA TCTTTCATTT TTATACTGGA TTCTCACGTA GATTCATGTT TGTGACATTA
GGCCCGAATT CTCGCGCGAA AGTACAAGGA GCTTACTGAA AAGGAGATGC GCAAATGGGA
AAAGAAAGCC GAACAGGACA AGATCCGTTA CCAAGAGGAA ATGAAGCACT ACGTGCCGGC
CGAAGATCCC ACCGGCGGCG GTAAGCGCAA GAAGGCCAAG AAGGACCCTA ATGCACCCAA
GCGAAACATG TCGGCGTACT TCTTGTACTC CATTGAAGTC CGTCCCACCG TCAAGGCGGA
CAACCCCGAA GCCACCTTTG GAGGAATTGC CCGGCTGATC TCAGAAAAGT TCAAGGCCTT
AAGCCCCAAG GAGCGTAAGG TGTGGGATGA CAAAGCGATA GCTGATAAAG AGCGTTACAC
CTCTGAAATG GAGATCTACA AGGAGGGATA AGCGTGGGGA CGCTGTTATT CGCAGGCCGA
TTGTATTTGT TTTACGAAAA AGGATATTTC ACAATATAGT ATACCATCAA GTATTCCAAC
ACGCCCATCT TCATGTCTAT ATACTATTAG TAATTATGGA GATTAAACCT CGTC
 
Protein sequence
MAPNDYSDEL ESEEEDEVEE EVEEPVKKKR SAKKWKDPNK PKRAMSAFFL FSQGNRVNVK 
EEFPEASFGE VARILARKYK ELTEKEMRKW EKKAEQDKIR YQEEMKHYVP AEDPTGGGKR
KKAKKDPNAP KRNMSAYFLY SIEVRPTVKA DNPEATFGGI ARLISEKFKA LSPKERKVWD
DKAIADKERY TSEMEIYKEG