Gene PHATRDRAFT_24493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_24493 
Symbol 
ID7196002 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp704582 
End bp705555 
Gene Length974 bp 
Protein Length249 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176635 
Protein GI219109763 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.608395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CATTCCTACG CTGGTCAACA AATCAACCTC CCAGATTGCA ATCGCGCAAC CTGAAAAAAT 
AAAAATACGA ACTATGGCCA CCCGCTGTGC TTTTGAGAAC TCGAACGAGA TCGGCGTGTT
TGCCGCGCTA ACAAATGCAT ATTGCCTGAC AGGTACGTTT TGTTGTGGTC TATTGACAAC
TGTAGAGTGC GTGAAGCATT TACATCTTGA AATGGTACAT CTGACGCTTT TTGTCATCTT
GAAGGGATTG GTGGATCCGA GAACTTTTAC TCTGTCTTTG AAGCCGAATT GGCGGAACAT
ATCCCCGTCA TTCATGCTAC GATTGGTGGC AACCGCTTTG TAGGACGCAC AACTGTTGGA
AATCGGAGAG GCATTCTGGT GCCAAACACG ACCACCGATC CGGAGTTGCA ACACTTACGA
AATTCTCTTC CGGATGCCGT TGTCGTTCAG CGTATAGAGG AGAGACTTTC AGCTTTGGGG
AACATAATCG CAACCAACGA CCACGTGGCC TTGGTACACC CGGATACCGA TCGTGAAACT
GAAGACGTGA TTGCGGATGT CTTGGGAGTG GAAGTTTTTC GTCAAACTGT TGGGGGGCAG
GCTCTGGTTG GATCCTACTC CAAATTCACG AACCAAGGTG GTATGGTCCA TCCAAGAACC
ACGGTCGAAG ATATAGAAGA GTTGTCCTCC CTGTTGCAAG TCCCGTTGGT AGCCGGTACC
GTCAACCGCG GTTCCGATGT ATTAGGAGGT GGTATGGTGG TGAACGACTG GGCTGCCTTC
TGTGGACTTG ATACAACCGG TACCGAAATC TCGGTGATCG AGAGTATTTA CAAGCTTTCC
AATCGTGGTC AACAAAGTAT GCAATCCGAT ATTGTCACGA ATATGCGAAG TTCGCTCATC
GATCAACTCT CGTAAGATGG AGCGATTCGT TTTGACTATT GTTAATTTTC GACTAAGCAT
GCTGCAATAC CCTT
 
Protein sequence
MATRCAFENS NEIGVFAALT NAYCLTGIGG SENFYSVFEA ELAEHIPVIH ATIGGNRFVG 
RTTVGNRRGI LVPNTTTDPE LQHLRNSLPD AVVVQRIEER LSALGNIIAT NDHVALVHPD
TDRETEDVIA DVLGVEVFRQ TVGGQALVGS YSKFTNQGGM VHPRTTVEDI EELSSLLQVP
LVAGTVNRGS DVLGGGMVVN DWAAFCGLDT TGTEISVIES IYKLSNRGQQ SMQSDIVTNM
RSSLIDQLS