Gene PHATRDRAFT_17954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_17954 
Symbol 
ID7196598 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp2440800 
End bp2441707 
Gene Length908 bp 
Protein Length158 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177517 
Protein GI219111531 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGACACTCTC TCTGTCAATC CACCAAACCG CTCTATCCAA CTCTCCGGAA CGACACAAAT 
AGGCCAAGAT GAGCGACAGT GAGGATTACC ATATCGAAAG CACCGATGCG GGTGCTTCCG
CTACCATTCC GATGGAAGCG GGACAGATCA AGAAGGGAGG GTACGTTCGT TTATCCGCAC
CGAAAGGAAA CCGAGTTCGG CCAAGCAAGC TCCCCAGCAG GATGGAGCAC AGACCCCGTA
GACTATCGTA GTCGTTGCAT CGCGAACCAT ACCTTTTGTG GGATGCGTTT GGGATGGACA
CGAATTGCCA TTGCGAGCGA GCGTCATTCC GTCTCGACCT ACGCTACGCT ACGGAATCGT
ACCGATATAT CGCGAGAGAC TCGCGTTGTT GTTGTTGTTG TTGTTGTTGT TCCCGTATTG
ACATTTCCCG TCGCGGCGTT CTCACAAAAC TGCTCGTTTT CGGTTGCGAT TATTGTCTCG
GAACATACAG ATACATGATG ATCAAGGGCA AGCCCTGCAA GGTTCTTTCC ATCTCGGTCT
CCAAGACTGG CAAGCACGGA CACGCCAAAT GCAACTTTAC CGCGGTCGAT ATTTTCACCG
GTAAGAAGCT CGAAGATATG ATTCCTTCCT CGCACGGAAC CACCGTCCCC ATTGTCAACA
AGAGCGACTG GGAAATTATT GACATTGAGG GCGATGCCCT CACGCTCATG GATGAAGGTG
GCAACCAGAA GACCGACCTT AACCTCCCCA CCGTCCCCGA GACCATGGCA GAAGAAATTC
GCGAGGCCTG GAGCGGTGGT GAAAACCAGA TTACGGTGTC TGTTCAATCC GCGGTCGGCA
TTGAACAGAT CATCTCGTAC AAGAAGGAGT CCTAAGCTTG TAGTAAAACA ATATCTGCTT
TTGCGTCG
 
Protein sequence
MSDSEDYHIE STDAGASATI PMEAGQIKKG GYMMIKGKPC KVLSISVSKT GKHGHAKCNF 
TAVDIFTGKK LEDMIPSSHG TTVPIVNKSD WEIIDIEGDA LTLMDEGGNQ KTDLNLPTVP
ETMAEEIREA WSGGENQITV SVQSAVGIEQ IISYKKES