Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_17954 |
Symbol | |
ID | 7196598 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 2440800 |
End bp | 2441707 |
Gene Length | 908 bp |
Protein Length | 158 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177517 |
Protein GI | 219111531 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AGACACTCTC TCTGTCAATC CACCAAACCG CTCTATCCAA CTCTCCGGAA CGACACAAAT AGGCCAAGAT GAGCGACAGT GAGGATTACC ATATCGAAAG CACCGATGCG GGTGCTTCCG CTACCATTCC GATGGAAGCG GGACAGATCA AGAAGGGAGG GTACGTTCGT TTATCCGCAC CGAAAGGAAA CCGAGTTCGG CCAAGCAAGC TCCCCAGCAG GATGGAGCAC AGACCCCGTA GACTATCGTA GTCGTTGCAT CGCGAACCAT ACCTTTTGTG GGATGCGTTT GGGATGGACA CGAATTGCCA TTGCGAGCGA GCGTCATTCC GTCTCGACCT ACGCTACGCT ACGGAATCGT ACCGATATAT CGCGAGAGAC TCGCGTTGTT GTTGTTGTTG TTGTTGTTGT TCCCGTATTG ACATTTCCCG TCGCGGCGTT CTCACAAAAC TGCTCGTTTT CGGTTGCGAT TATTGTCTCG GAACATACAG ATACATGATG ATCAAGGGCA AGCCCTGCAA GGTTCTTTCC ATCTCGGTCT CCAAGACTGG CAAGCACGGA CACGCCAAAT GCAACTTTAC CGCGGTCGAT ATTTTCACCG GTAAGAAGCT CGAAGATATG ATTCCTTCCT CGCACGGAAC CACCGTCCCC ATTGTCAACA AGAGCGACTG GGAAATTATT GACATTGAGG GCGATGCCCT CACGCTCATG GATGAAGGTG GCAACCAGAA GACCGACCTT AACCTCCCCA CCGTCCCCGA GACCATGGCA GAAGAAATTC GCGAGGCCTG GAGCGGTGGT GAAAACCAGA TTACGGTGTC TGTTCAATCC GCGGTCGGCA TTGAACAGAT CATCTCGTAC AAGAAGGAGT CCTAAGCTTG TAGTAAAACA ATATCTGCTT TTGCGTCG
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Protein sequence | MSDSEDYHIE STDAGASATI PMEAGQIKKG GYMMIKGKPC KVLSISVSKT GKHGHAKCNF TAVDIFTGKK LEDMIPSSHG TTVPIVNKSD WEIIDIEGDA LTLMDEGGNQ KTDLNLPTVP ETMAEEIREA WSGGENQITV SVQSAVGIEQ IISYKKES
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