Gene PHATRDRAFT_1785 details

Gene Information

• Locus tag: PHATRDRAFT_1785
• ID: 7196749
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: -
• Start bp: 2143053
• End bp: 2145266
• Gene Length: 2214 bp
• Protein Length: 433 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002177456
• Protein GI: 219111409

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.287483
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GGTATTTTCG AGTGCGATTA TTGTCATGCT GACATTTCCC AATTGCCGCG AATACGTTGT 
GCGGTGTGTG TCGATTTCGA TTTGTGCCTG GACTGCTTTA CTTCGACTGA CCATGCAACG 
GCAATAGCCC GTCTAAAGGC GGCACCGGAC CAAAACGGTA TGGCAGCCTT GTCCGCCATT 
CAACACGAGG CTACACACGG CTATCGTGTT TGTGATAGCA CGCGTTATCC ACTTTTTTCC 
ACTGCTCGCA CCCGAGTTAA CAGATTGAAT ACCAATGTCG AGAAGAATTC CGGTATGAGC 
AATGAGGAAC AAAGAGTTTC CGATATTAAT GTAGCATCGA GCGGGATTGA TGAAATAGGG 
GATGAAATGG ATGTGGATGA AGCAGCGCTT GGTTCAAACG AGGAAATTAT GGAACGGGAA 
CAAGATGCCA ACTCGATGGA CGTGACTGAG CTAGAGAGAA CCGCTGTTAA CGACGGCGTC 
CTGACTGAAG AATTAAACTC TACCGATAAA TATATCGTTT ACGATGATCC AAAATTTTTT 
TGGACTGTGG AAGAAGACTT ACGTTTGCTG GAAGGTATCC AGACGAACGG TTTGGGAAAT 
TGGGTTGAGA TCGCAGAGGC AGTCGCAGGT CAAGGATCCA TTGGTAAGAC CCCTCGTCGC 
TGCATGGAGC GCTACTTTGA CGATTTTCTT GGACGCTACG GCCACATTCT CCCGTCACAC 
ACTTTACAAG CTGAAGGTGA GGATGAAGTG GAAGAATCCG ATGCTACAAA GTATAGTGTA 
GAAGAATTTG ATAAGGGAGA TACCGACGAC ACTCCGTCGC GTACTTCCAA ACGTCGGGCG 
GTGATGATGC GTAGCCCAAG CTCAATGTCA ACCATGGCGT TCACGAGCCG CAAGAAGTAC 
AAGGCCATTC CAACCGAGAC TCTCGAAGGA TATGGCGAAT TTTGGGCCAA TCCATATTTA 
CCGCCAATTG AGGGCGTGAG GACTGGTCAA GAAGTAGGAC GTGACCATGC TTACAAGGCA 
GAACAGCTTT TCGTAAAAAT GAGCATGGCG ATGGATAGCA TTGAACAAGT TAAAAATTTA 
CACAAAGAAT GGACTGAGAC TCGTCTTTTG AAACCCGGTG GTCCTACCGT CCTTCCTCCT 
CGACCGGACG ATGTTGTTGG AATGACAGGT GCTGAACTCT CTGGCTTCAT GCCTAGACGG 
GAAGATTTCG ATGTGGAATG GGAAAATGAT GCCGAGCAGG CCGTGGCAGA TATGGAATTT 
CTTCCTGGCG AGCCGATAGA GGACAAGCAA CTTAAACTAC AGGTACTGGC AATCTACAAC 
TCTAAGCTTG ATGAACGTGA GAAGCGCAAG AAATTCGTCC TCAGTAGAAA GCTATATGAT 
TATCGGAAAA CCCAAACAGA ACACGAGAAG CTCCCACAAG ACGAACGTGA CCTTGTGCAT 
CGAATGCGTC TGTTCGAGAG ATTTCATACG CCCGAGGAAC ACAAAGAATT TCTTGCGGAT 
CTGCTCAAGG CGAAGCGCCT TCGCAAGGAG ATTGCAAAAC TGCAAATGTA CCGAAGACTT 
GGCATCCGCA CATTGCTCGA AGCGGAAAAA TACGAATTAG ACAAAGAGCG CCGGCAGTTC 
CACAAGACAG CCCACACACA GAAGAACACC GATGTCAGCA CACCAGATGA GAATACTGCC 
GCAACCTCGG CGGAGGTAAG TGGCCGTTCA GGAATGTCTC AGTCCGTAGG AACTGTTTCA 
TCTTCATATT GGAAGCAATA CCGCACGGGT GATCGTCGTG AGAGGAAGAG TATCAATCGG 
GGCGTGCCCT GGGCAGACAG CCAAGAGACG AGCAATAATT TGAAAAATAA TTCGGCTGAT 
GGGTCTAGCA AAGTAGTAGA CACTAGAAGA GATGATGGGG ATATGGATGC TGTGCAGCCA 
GTAGAAGATA CAATTGCGAT ACAGGCCAAA CTCGAAGTTT CTTCGAGGGC AACCAAGGAA 
GACGACTTTG CACATTTGCC TGGTTACAAT CTGCTTTCCT CTCGTGAAGT GTTGTTGTGC 
CAACGCACAA GGCTAACGCC AGAACAATAT TTGGAGGTAA AGAACGTGCT GATTCAAGAG 
TCACTGCTTA AGGGGCTTCT GGATAGGGAG GGTCCCGGAT CTAGCAAAAG AGCGTTGGTA 
CGGATCGACG TAGAGCGACG GGGCGACGTA ATAGACTTTT TAGTTCGGGC CGGC 

 

Protein sequence

GIFECDYCHA DISQLPRIRC AVCVDFDLCL DCFTSTDHAT AIAQLNSTDK YIVYDDPKFF 
WTVEEDLRLL EGIQTNGLGN WVEIAEAVAG QGSIGKTPRR CMERYFDDFL GRYGHILPSH 
TLQAEGEDEV EESDATKYSV EEFDKGDTDD TPSRTSKRRA VMMRSPSSMS TMATGAELSG 
FMPRREDFDV EWENDAEQAV ADMEFLPGEP IEDKQLKLQV LAIYNSKLDE REKRKKFVLS 
RKLYDYRKTQ TEHEKLPQDE RDLVHRMRLF ERFHTPEEHK EFLADLLKAK RLRKEIAKLQ 
MYRRLGIRTL LEAEKYELDK ERRQRDDGDM DAVQPVEDTI AIQAKLEVSS RATKEDDFAH 
LPGYNLLSSR EVLLCQRTRL TPEQYLEVKN VLIQESLLKG LLDREGPGSS KRALVRIDVE 
RRGDVIDFLV RAG