Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_17846 |
Symbol | |
ID | 7196740 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 2102855 |
End bp | 2103658 |
Gene Length | 804 bp |
Protein Length | 145 aa |
Translation table | |
GC content | 45% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177446 |
Protein GI | 219111389 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGGCCGTAGT AGAGGAGAAC ATAGACAACC ATGGCGATTA TCAGTGAGTG ACTGTTATGC ATCGTGCTGG CGCTTGTGGC GTATGAAGTC ACCGGTTGCG TATTGCGCTG ATAAAAATCA GAGAGCTTGA CGAGTCAAAA TAATTGTTGG CTACGACTTG CTTGTGTTCC TGTTGTCTAG AAAGTAGCTG ATGAGGCACC TTGAAACGAC GCAAATAGAA GTGCTTTGAG TTTTCGCTAA GATGTGAAAG TCTTACATTT TGCACTTTTT GTATTCCAAC AGAGGCAGGA AAGGTTGTTA TTGTCCTTGC CGGACGTCAC GCTGGTAAAA AGGCAGTCGT TGTCAAGACC TTTGACGATG GCACTAGTGA CAAGAAGTTC TCGCATATTC TAATTGCGGG CCTGGCACGA AACCCTCGAA TGGTTACGAA GGGAATGAGC AAAGCTAAGG TTGAAAAGCG AAGCAAACAA CTGAAGCCTT TTGTCAAATA CATTAATGTA CGTCATGTTT TCCCAACACG TTACGTCGTC GACATGGATT TGAAGAAAGC TGTCGACGAG GCTGATCTTG TTGATGCCGA GAGGAAGGTG GACGTCAAGA AAGGTCTCAA GAAACTTTTT TACGACCGAT ACCTCAACCA GAAGGAGGTC ACCAGTGAAA AGAAGTCACA AGGCAGTTCG TACTTTTTCC AGAAACTGCG ATTCTAAAAT AGATCATTGG GTGTACTCCA AGCCTTAGGA ACTTCTTGCG CGTGCATGTT TCAATGCACA AGTTTAACCA CATACTTGAA ATTTGCGTAC TAGG
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Protein sequence | MAIIKAGKVV IVLAGRHAGK KAVVVKTFDD GTSDKKFSHI LIAGLARNPR MVTKGMSKAK VEKRSKQLKP FVKYINVRHV FPTRYVVDMD LKKAVDEADL VDAERKVDVK KGLKKLFYDR YLNQKEVTSE KKSQGSSYFF QKLRF
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