| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_17728 |
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| Symbol | |
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| ID | 7196813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 1748345 |
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| End bp | 1750131 |
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| Gene Length | 1787 bp |
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| Protein Length | 509 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002176843 |
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| Protein GI | 219110183 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.304466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTATCCCCAT CTAGTAGTAG CCCCAGCGTC AGTTCTCTCA AACTGGGAAC GAGAATTTGA
AAGGTTTGCC CCTCATTTGA ATGTTGTAAA ATACCACGGG AGTATGAACG AACGTTCAGA
GTTGCAAGAG GATCTACGCA TTTATTTACC AAGCAATCGA GCAGCTCGCA AAAAGCACAA
AGTGACACCA CTAGACGTTA TACTAGTGCC CATCACCTAC TTTCAAAAAG AGAAATCGGA
CGATCGCTCA TTTCTTCGTC GCTTCAACTA TCACTACATG GTGGTGGATG AAGCACATCT
ACTAAAGAAT GCCAAAGGAC TGCGATACAA GTCACTGGAT CGCTTCACAA CGCTCCATAG
ACTGTTATTG ACAGGTACAC CCGTTCAGAA TTCCCCCAAG GAGCTGATGT GTTTGTTATG
CTTTCTCATG CCGTTGTTCT CGCGAAAGGG AGGAAGCGAT TTTGATGATG AACAAGGGAA
TGATGGTGGA GAAAGTATGC TACAGCACTT CGTGTCGATG GAAGGAGGGA ACACTCTGCA
TGACGAGACA GCGTACAAAA AGCTGAAGCA GCTATTTGCC CCCTTTGTCT TGAGACGTAG
AAAGCAAGAT GTCCTTAGTC AGATCATGCC TCCAAAAGAG CACGCTGTGG AGATTGTGCA
GCTTGACGAG TCGTCTCGTT GCCTCTACGA TAAAATCATT TCCGACCATA TTCGTTCCAA
GAAAAAAGGC GACGCCTCGT CGAGAGAGCA TTTGTTTACT CAACTTCGAA AATGCGCTCA
TCATCCGCTA CTTCTTCGAG CTCGGTATAC TTCTCCGACC GAGAAGGAAC ATTTGGCGAA
ATGGTTTTAT CAGTACGGTG CCTTTCGTGG AGAAGGGTGT ACAATGGTCA AAGTTCGCGA
GGAATTGGAT CGATTCAACG ACTTTGAAAT TCATTTGACT GCTTTAGAAT TGCTGGAGGA
GAATCGACTT CGTCACGAGC AACTTGGTCG TTATGTTTTG CAAGAGAAAG ACTTGTTTTC
TTCAGCAAAA TGCAAGCGGC TTCGGGCCAT TCTACCGGAT TTGGTTGGTA AAGGACACCG
TATCTTAATT TTTTCCGTTT GGACAAGTTG CCTGGATCTG CTAAGTTGTT TGATGGAACA
AATGGGTCTA GGGTATCTAC GTATGGAAGG CAGCACACCT GTCAACGAGC GACAGGCCCT
GATCGATCGA TTTACGAGCG AGACCAGTAT TCCGGTTTTT CTGCTCTCCA CGAAGGCGTG
TGGGTTGGGT ATCAATTTGA CTTGCGCGGA TACCTGCATT ATGCACGATC TCGACTTCAA
TCCTTTCAAC GATTTGCAAG CGGAAGATCG TTGTCATCGT ATTGGGCAAA AGAAACCTGT
CAAAATTATC AAAATGATAA CGGAGGATAC AGTTGACGAG GATATTTACA AAATGCAGCA
ACGAAAGGCT CGAATGAATG CTGCCATCAT GGATACAGAT TCTAGGGAAT GGAACAACGT
TGCCGCCAAT GAAAAGGGAA ACATGCTGAA ACATGCAGTG GATCGCTTTT TGCGTTCACC
CACCCAGTCA AGGTCTTCGA AAGAAAGAGG TGACAAGGAA AATAGCGGCA ATATTGACAT
GACGGATGTA TAAACTGTGC AGCAACACAG ACTGGATGCC AGAAAAAAGT GGCCAGTTCC
ACTTTTTCTT TTTCAAATTG TACATAGCTT TCCGACAGCT ATTCAGTCAT CTCAATGGCA
TGGCAGTCCA GTTAACTCGA GAAATATTTA GTCAGCTTTA TGAACCC
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| Protein sequence | MNERSELQED LRIYLPSNRA ARKKHKVTPL DVILVPITYF QKEKSDDRSF LRRFNYHYMV
VDEAHLLKNA KGLRYKSLDR FTTLHRLLLT GTPVQNSPKE LMCLLCFLMP LFSRKGGSDF
DDEQGNDGGE SMLQHFVSME GGNTLHDETA YKKLKQLFAP FVLRRRKQDV LSQIMPPKEH
AVEIVQLDES SRCLYDKIIS DHIRSKKKGD ASSREHLFTQ LRKCAHHPLL LRARYTSPTE
KEHLAKWFYQ YGAFRGEGCT MVKVREELDR FNDFEIHLTA LELLEENRLR HEQLGRYVLQ
EKDLFSSAKC KRLRAILPDL VGKGHRILIF SVWTSCLDLL SCLMEQMGLG YLRMEGSTPV
NERQALIDRF TSETSIPVFL LSTKACGLGI NLTCADTCIM HDLDFNPFND LQAEDRCHRI
GQKKPVKIIK MITEDTVDED IYKMQQRKAR MNAAIMDTDS REWNNVAANE KGNMLKHAVD
RFLRSPTQSR SSKERGDKEN SGNIDMTDV
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