Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_17531 |
Symbol | |
ID | 7196166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | + |
Start bp | 1170494 |
End bp | 1171162 |
Gene Length | 669 bp |
Protein Length | 193 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | fucoxanthin chlorophyll a/c protein |
Protein accession | XP_002176735 |
Protein GI | 219109965 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ACGTCACTTT GGTATCCTTT TTGACCATGA AGATCGCTAG TCTTTTCGCT ATCGTCGGCT CTGCCGCTGC CTTTGCACCG GCTTCCCAAA TTCATCGTGG ATCTTCGTCT CTTTCCGCCT GGAAGGACGA AACCGTCGTC GGAATAACCG CCCCTGTTGG GTTTTTTGAT CCCCTCGGTC TGTCCAAAGA CAAGAATGAT GAAACAATGG GTTACTACCG TGAATCCGAA TTGAAGCATG GTCGCGTTGC TATGGCTGCT TGTTTGGGAT GGTTCATCAC TGCTGGAGGT ACCCATCCCG CCTTTAACAG TGAGCTTTCC AGTGATCCTC TTGAGGCTGC CCGGCAGCTT CCGTTCGTCG CTTGGTTGCA GTTCATCCTT GGCTGCGGTG CCGTAGAGTG GCTAACGGAA CAGATTAAGA AGCGTCCCGG GTACGTCCCT GGTGATGTTC TCGGAGCATC GTACTGGGCT GACAACAGCG ACGAAGGATG GGTGGACTAC CAAAACAAGG AGCTGAACAA CGGACGACTT GCTATGCTTG CCATCGCAGG AATCTACGCC CAGGACATTC TCTTCAACAA CTACGGTGAC ATGCTTTTTA AGCGCTAGAT AGTACAAGAT CCTCATTTTG GTCCTTAATT TGACTTGCAG AGATATATTG ATCGCTCTT
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Protein sequence | MKIASLFAIV GSAAAFAPAS QIHRGSSSLS AWKDETVVGI TAPVGFFDPL GLSKDKNDET MGYYRESELK HGRVAMAACL GWFITAGGTH PAFNSELSSD PLEAARQLPF VAWLQFILGC GAVEWLTEQI KKRPGYVPGD VLGASYWADN SDEGWVDYQN KELNNGRLAM LAIAGIYAQD ILFNNYGDML FKR
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