Gene PHATRDRAFT_17519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_17519 
Symbol 
ID7196159 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp1135766 
End bp1136510 
Gene Length745 bp 
Protein Length143 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176729 
Protein GI219109953 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGTCCTCATT CCAGAGATTT TATCGCCAAC ATGCCCGAAG TACAATCAGT TCAAGTTTTT 
GGAAAGTGAG TGATCAGCAG TACGGAGGAG GAATATAGAG ACATTTCCCG ACCACGCTAT
TGTGGGTGGA GGCTGTGGTT TTGTTACAGT TCGTACGGTG CTCCATTGTA CAGGTTTAGC
ATAGGACTGC AGAGTCGATC GATAAGCCAA TCATCGTGAT ATCGTCCGCC GCTCTAGACA
TGGTGAAATT GTACACTCGT CGTCTGACAC CAACATTCTT ACACTTCTTA CAGGAAAAAG
ACCGCCACCG CGGTGGCCTT TGCCAAGCAG GGTCGCGGTC TCATCAAGGT CAACGGCCAG
CCCATTGAGT TGATTCAACC CGAGTCTCTT CGTCTGAAGG TCTTTGAGCC CGTCTTGATT
GTAGGACAGG AGAAATTTAG CAATATCGAC ATCCGCATCC GTGTCAAGGG CGGTGGTATT
ACGGCGCAGA TTTACGCCAT TCGGGCGGCC ATTGCCAAAT CCATCGTGGC CTACCACGCC
AAGTACGTGG ACGAACAATC CAAGAACGAA CTGCGAAAGA CGCTTATGGA GTACGACCGC
AACATGCTGG TCAGTGATCC TCGTCGCTGC GAACCTAAAA AGTACGGAGG ACGAAGCGCC
CGTGCCCGTT TCCAAAAATC GTACCGTTAG ACGATGGCCA CGGCTTTTTA AACAAACAAA
CCAACCAACC ATTTACACCC CTGGA
 
Protein sequence
MPEVQSVQVF GKKKTATAVA FAKQGRGLIK VNGQPIELIQ PESLRLKVFE PVLIVGQEKF 
SNIDIRIRVK GGGITAQIYA IRAAIAKSIV AYHAKYVDEQ SKNELRKTLM EYDRNMLVSD
PRRCEPKKYG GRSARARFQK SYR