Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_17427 |
Symbol | |
ID | 7196347 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | + |
Start bp | 854577 |
End bp | 857213 |
Gene Length | 2637 bp |
Protein Length | 695 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002176667 |
Protein GI | 219109828 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGACTCCATC TGAAGTCCAT AATACTAGCG GTCCTCTGTT TCAGTATTGT AAAAGCGTTT CTTGAACCAA CAAACTTCTT AACAACTCGA AAGAAACCGA GCAGAACCAC AACGTCCTCT TTCAAAATGT CCAACAAAAA GTTCGAGATC GAGATACTCT CCACGACGGC AGTCACTACC AAAGGTGGTC TGTTGCATCG AGTCAAGCAC AAGTCGTCGT CCACCAACAC TGATATGATT TTTGCCATTT TTCTGCCTTC CGTTTACAAG ATTGGCACGA ACAAAGCACC ACTTCCTGCG ATCTGTAAGT TCTGATGCTC AGATGATGAG TGGGAGCCGA CATCGTATTT CAACGCAGTA TTCTTACACA GATTTTGCTT TGCCGAAAAA TTGTTGCGTT TGTTCACAGA TTGGCTAAGC GGCCTGACAT GCACAGATCA AAACTTTTGC CAAAAGGCTG GTGGTAGCGC CTTTGCGAGA GCCGAGGAGG AAGGCATCGC TATGATCATG CCAGATACGT CTCCCCGTGG GGAAGACATT CCATCCGATG ACAGTTACGA TCTAGGGACT GGAGGTGGCT TCTATGTAGA TGCCACGAAC GCCCCTTGGG ATGCCAACTA CAATATGGAA TCGTATATTT CCAAGGAGTT GCCCGCTCTG GTGGAATCTG AATGGGGAGT TGGCGCCAAT GGAGTGCGTT CGATATGCGG TCATTCGATG GGAGGACACG GCGCTCTCAC GCTGGCGTTG AAAGCTCCTG CTGGATCATG GGCGTCTGTT TCAGCTTTTT CTCCCATTTG CCATCCCACT GCCTGCCCTT GGGGTGAAAA AGCCTTCAAA AACTATTTCG GATCGGTCGA TGCAGGCAAA CCTCACGATG CTACTTTGCT TCTAAAAAAT AGTGGGACAG GTTCCATTTT TGACGATATT CTAATAGATG AGGGCACAAA CGACGAATTT CGCGATGCGG GGCAGCTTTT AGTGGAAGAT TTTGAGAAGG CTGCCGAAGA AGTTGGCCAA AAGTTAACGG TTCGTCGGCA AGACGGACAC GACCATTCGT ACCATTTTAT TGCCGCCTTT ATTGTGGACC ATATCGGGTT CCATGCCAGT CGGCTCCGAA AAGCTGCTGG TAAAGCAGAA CTTCGGATGG TTGAAAGGGA GGCTGGTAAT CTTAGTGAAA TGGTGGGTAA ACCAATCAAA TGCAAAGCAA TGGTTGCTCG GGCTGCCAAG GAACCGTTAA CTATGGAGGA GATAACAGTG GATCCACCGA AAGCAGGCGA AGTACGCGTC AAGGTGGTGG CGAATGCATT GTGCCATACA GACACCTACA CACTAGAGGG AAAAGACCCA GAAGGTCTAT TCCCCTGTAT CCTTGGTCAC GAAGCTGGAT GCATCGTCGA ATCCGTCGGA GAAGGTGTAA CCACTGTTAA ACCTGGCGAC CATGTCATTC CGTGAGTGAT CTTGAATAGA TCTTGATATG GTCGGTTCAC ATGATTACTG ACTTTTCGTT TGTCTTTTTT AAATGATTCT GGTTTACGAA GATGCTACAC GCCGCAGTGT GCGGAGAGCT CATGCATCTT CTGTCAAAGT CCTAAAACTA ACCTTTGCCC ATCTATCCGT GGGACCCAAG GGAAAGGCGT CATGCCCGAT AATACGGTTC GCTTCAAGGA TAAAAACGGA AATCCTATTT ACCACTTCAT GGGATGCAGT ACTATGTCGG AATATACAGT CCTTTCCGAG ATCTCTTGCG CCAAGATTGC TCCTGAAGCG CCTTTGGAAA AGATGTGCCT ATTTGGTTGC GGAGTTTCAA CTGGCCTTGG AGCTGTTCTC AACACTTGCA AGGTCGAGCC CAACTCGTCA GTCGCTGTTT TCGGACTTGG TGCTGTCGTA AGTAGCCGCG TTTCACGATT CGGTTTGTGC TGTATTATTG TTTCTAAGGT CATGGCATCT TTTTATCAGG GGTTGGCTGT TGTTCAAGCT GCGAAAATGG TTGGCGCTAG TCGCATCATT GCTGTAGATA TCAACGCATC CAAATTCCAG GCGGCAGTAG ACCTTGGAGC CACCGATTGT GTCAATAGCG CCGAGCTGGA CAAGCCTGTT CAGCAGTATA TTGCAGGCGA TTTAACCCAG TGGGGTGTTG ACTACACTTT TGACTGTACG GGAAACACTT CAGTCATGCG TGCTGCGTTA GAATGTGCTC ATCGTGGCTG GGGCACTTCT TGCGTTATCG GTAAGGGTTA TAAGACGTGA TGCCACGTCA TTTACTTTGT GGCACCCAAA AACTTATATC CCTCAACTGT CTCTTTATTT CTCAACAGGA GTGGCTGCCT CTGGCCATGA AATTTCAACT CGTCCATTCC AGCTCGTAAC TGGTCGCATC TGGAAAGGCA CTGCATTTGG AGGCTACAAA AGTCGAACCG ATGTCCCAAA ATTGGTTCGA CAGCATCTGG ATGGGAACTT ACCGATCGAC CATTTTATTA CGCATGTTTT CCATGGGGTT GAAAAAACCA ACGATGCCAT CAATGCTATG CATGCTGGCA ATTGTCTTCG TGCCGTCGTT CACTACTAAC TGTAAGTTCA CTCTGACAAA GGACACACAG TGAAGAAATA CTTACATAGT TTACAGTTAG CACTATC
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Protein sequence | MSNKKFEIEI LSTTAVTTKG GLLHRVKHKS SSTNTDMIFA IFLPSVYKIG TNKAPLPAIY WLSGLTCTDQ NFCQKAGGSA FARAEEEGIA MIMPDTSPRG EDIPSDDSYD LGTGGGFYVD ATNAPWDANY NMESYISKEL PALVESEWGV GANGVRSICG HSMGGHGALT LALKAPAGSW ASVSAFSPIC HPTACPWGEK AFKNYFGSVD AGKPHDATLL LKNSGTGSIF DDILIDEGTN DEFRDAGQLL VEDFEKAAEE VGQKLTVRRQ DGHDHSYHFI AAFIVDHIGF HASRLRKAAG KAELRMVERE AGNLSEMVGK PIKCKAMVAR AAKEPLTMEE ITVDPPKAGE VRVKVVANAL CHTDTYTLEG KDPEGLFPCI LGHEAGCIVE SVGEGVTTVK PGDHVIPCYT PQCAESSCIF CQSPKTNLCP SIRGTQGKGV MPDNTVRFKD KNGNPIYHFM GCSTMSEYTV LSEISCAKIA PEAPLEKMCL FGCGVSTGLG AVLNTCKVEP NSSVAVFGLG AVGLAVVQAA KMVGASRIIA VDINASKFQA AVDLGATDCV NSAELDKPVQ QYIAGDLTQW GVDYTFDCTG NTSVMRAALE CAHRGWGTSC VIGVAASGHE ISTRPFQLVT GRIWKGTAFG GYKSRTDVPK LVRQHLDGNL PIDHFITHVF HGVEKTNDAI NAMHAGNCLR AVVHY
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