Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_17401 |
Symbol | DHLTA_1 |
ID | 7196333 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 775575 |
End bp | 777280 |
Gene Length | 1706 bp |
Protein Length | 492 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | dihydrolipoamide acetyltransferase |
Protein accession | XP_002177160 |
Protein GI | 219110817 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CAAATTTTAT TCCACACAGT CCGAGCAGTT TGTGTGGTTT TGGGGAAGAA CGAGACGGAT TCATTGGCGC AACCAAGATT TGGCTATTGG ACTTTGCCGA CTATCGACCA CTAGTACAGC AAAAGTACAC AGTACAATCA ATGGCTTCCC GAACGCTCTG CCAACGTACT TGGCTGTTGG CGAGCAAACG TCCGGCAGCT TGGTCGAATT CGGTGGGAAG ATCTACCGGT AGAGCGCCTT CGCTGGAGCT TTTGGGAGGC TATCCAGTGC GCTTCTTCTC GAGTTATCCA CCTCATGAGT TAGTAGGTCT ACCAAGTCTC TCACCGGTAA GACATCGTCC CATCAGTGAA AGAAGGGTTT CTTTTTGTGT ATTTTCGGTT GCTCATTTCG ACAAGTATTC TTTTCTCTTC TAGACGATGG AATCCGGATC CATCGCCGCT TGGAATCTCA AAGAAGGCGA GTCCTTCATT GCTGGTGATA TTTTCTGCAG TGTAGAAACG GACAAGGCAA CCGTAGACTT TGAAGCACAG GACGATGGAG TGTTGGCAAA GATTCTGGCA CAAGCCGGGC CCGACGAAAT CAAGTGCGGC GATCCCATTA TGATCACCAT CGAAGACGAA GCCCATCTTG GGGCCTTTGC CGACTACACA CTCGACTCAG GAACAGAGTC ATCACCACCA GTAGCGGATG CTGCCCCGAC CCCAACCGCA TCACCCCCCT CTCCGAAATC TTCACCGGCC GAGAACAAGG GTACTCCGGA TGGGACGACG TCCGCCACGT CACCAGATAC GGGTGATCGT ATCGTGGCGT CTCCTCTGGC CCATATGCTG GCGAAGGAAA TGGGCTACAA TATTTCCAAG ATCCCAGGCA CCGGGCCAAA TGGGCGAATT ATTGCGGCGG ACGTGAAAGA GTACACCCCG GGTGCCGTGG AAGATGCTGA TACAGTCGAC ACGCCGGCAC CCGCTCAGGC GGCCATGAAA AGCTCCCCGG CGCAGCCTGT TTCCGGATCG GGATACACGG ATTATCCCTT GTCCGAATCG GCCAGAGAAG TTGCCGCACG TTTGGCTCAA GCGAAACGCA ACGTGCCGCA CTACTATCTA ACTGTAGATA TTGCGGTCGA CGAGCTCTTG AAAATTCGGT CGACTTTGAA CGCCACCTTG GATGAGAGTG CCGCGCTCGG AGTATACGAG CTCTTGCTTA AAGCCGCAGC GCTTTCCATG AAGGCGGTAC CCTCCGCAAA TGCTTCCTGG ATGGACAGTG TCGTGCGTGT GTACGATTCG GTAGATATTA ATGTTGTTGT GGGTAGTGGT GATTCGCTCG TGACTCCCGT TATTCAAAAT TGCTCCAGTA AAGGTCTCAA AGCGATTTCG GAAGAACTCG GTTCTGCGGT AAAAGCCTTG GAAGAGGATG ACGATGCGCC TATTGGTGGC CTCGGAACGT TCACGGTTAT GAACCTTGGT ATGTACGGCG TAAAGTCTTG TGCCCCGATT ATTCGGGAAC CTCAAGCCTG CGCCCTGGCG ATTGGTGCTT TGGAAACACG AATTGTTCCT AACGACGACC CCGATGCGGA AGATATTTAC AAGGAAAGTG TCATGTTTAC AGCGACACTC AGCTGTGATC ATAGAGTGGT CGATGGAGCC GTTGGAGCGC AATGGCTACA GGCCTTCAAG TCACACGTTC AAAATCCAAC CACACTCTTA CTCTGA
|
Protein sequence | MASRTLCQRT WLLASKRPAA WSNSVGRSTG RAPSLELLGG YPVRFFSSYP PHELVGLPSL SPTMESGSIA AWNLKEGESF IAGDIFCSVE TDKATVDFEA QDDGVLAKIL AQAGPDEIKC GDPIMITIED EAHLGAFADY TLDSGTESSP PVADAAPTPT ASPPSPKSSP AENKGTPDGT TSATSPDTGD RIVASPLAHM LAKEMGYNIS KIPGTGPNGR IIAADVKEYT PGAVEDADTV DTPAPAQAAM KSSPAQPVSG SGYTDYPLSE SAREVAARLA QAKRNVPHYY LTVDIAVDEL LKIRSTLNAT LDESAALGVY ELLLKAAALS MKAVPSANAS WMDSVVRVYD SVDINVVVGS GDSLVTPVIQ NCSSKGLKAI SEELGSAVKA LEEDDDAPIG GLGTFTVMNL GMYGVKSCAP IIREPQACAL AIGALETRIV PNDDPDAEDI YKESVMFTAT LSCDHRVVDG AVGAQWLQAF KSHVQNPTTL LL
|
| |