Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_17300 |
Symbol | |
ID | 7196278 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 515277 |
End bp | 517030 |
Gene Length | 1754 bp |
Protein Length | 439 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177101 |
Protein GI | 219110699 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGTTCGTGTG GCATCGTTCG TCAACTGTTT CCCGTTCTCC TTAAGCGAAA ACTAGTCCGT TTCCGTCGTG TGTGATAGAC GCGGACCCCA AGCGTGGCTG AAACCGCCGT GACTGGGTTG TGTTTGCTTG TGTGCTTCGT GTGTGTGTGT GTGTGTAGGA GAGTGAGTAA GTGAGTGAAG ACCAGTCCGT CATCGACTTC ATCACGGCCG CCGGTAGCCC ACTCCTGTTT GCTCCTCTCC CGAGTCGCCA GTAGTATGGT CTTGACGGAT CGACAACGAG CGGATCTACA CGCTGGCATT TACGAGTATC TCCAATCCCG TGGTGACGCG TACCAAAAAG TAGTGGAGGC CTTGGCGCAA GCCGACCCCG AATGTACCAT CCCGCACACC ACTACTACCA GCAACGGCAG TAGTGCCGGC CTGACGAAGA CACCGCTCCT GGAGAAAAAG TGGACCGCTA TTCCGAGACT ACAGAAAAAG GTCCTCGAGT TGGAGCGACA GGCATCGCAC CACGCTAAAA TACACGCCCA TCGATCTGCC GCTGGTAGCG GCGGCGGGGC ACTGGAGGCG AACGACGGTG CGGGAGGCGC ACGTCGCCTA CTACCACGAT TACCCTGTCA ACATACACTA CAGGGGCACT CGTCTGTCGT GACCTGTGTG CGGGTACATC CCGTATTTAC TGTTGTAGTG AGCGGGTCCG AAGATGGAAG CGTCAAGGTA GGTTTGACGA AGTCGTCACC GAGCTCCATC TTGTTCAAAT CCACTGGCGT CAAGAGAAAT GTCCCGTGAT ACCGCCACAA ACTGCCGCTT GTCTTATAAA ACTTCTGCTG ATTCATCTTT GTTCACCTTT TTTTCTTTCC AAGGTGTGGG ATCACGAAAG TGGCGAATAC ATACGAACAC TGAAAGGGCA CACCAACACT GTCAATGGAC TAGCATTTAC CCCCACAGGA TCACATTTGG CGTCGTGCTC CACAGATCTT TCAATTAAGC TTTGGGACTT TCAAACGTAC GCGTGCATTA AAACGCTACG TGGCCACGAT CACACCATTT CGTCCGTAGT CTTTCTACCC TTGTTCGACA CACCCGCAGA TTCCGACGGT GCGAGCGGTG GCGACTTGCT GACGACCACC AAATGCAAAC GCTTGCTATC GGCCTCCCGT GATTGTACCG TCAAAGTGTG GGACTTGGAA ACCGGTTTCT GTGACCAAAC AATTCACGAT CACAACGATT GGGTCCGGAC TCTGGCAACG CGGGCCGACG GCTCCGTTTG GGCCTCCGCC GGAAACGATA CCGTTATTTA CGTATACGAA CAAGATCGTA TGAAAAAGGC CGTAGAATTG CGCGGCCACG AGCAAGTGGT GGAGTCCATA GCCTTTTTGA CGCAGGATAC AATACCCAAG AACAACGCAC AACGTCCCTC GAAGCACATA GAAACGGTCC GTGATTATTT GGTGTCGGGA TCGCGGGATC GGACCGTGCG GTTGTGGAAA GTATCCGAGG CTTCCTGTTT GATGGTGCTA AAGGCACACG ACAATTGGGT TCGCAGCGTC CTCATCCATC CCAACGGCAA CTACATATTG TCATCTTCCG ACGACAAATC CATTCGCGTG TTCGACATTA AGAATGAACG TTGTTTACGA ACACTGGAAA ATGCGCACAA CCATTTTGTA TCGAGTTTGG ATATGCACGC TACATTGCCC ATACTGGTAT CTGGTAGCGT CGATCAAACA ATTCGATGCT GGCCGCTGGA TTAG
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Protein sequence | MVLTDRQRAD LHAGIYEYLQ SRGDAYQKVV EALAQADPEC TIPHTTTTSN GSSAGLTKTP LLEKKWTAIP RLQKKVLELE RQASHHAKIH AHRSAAGSGG GALEANDGAG GARRLLPRLP CQHTLQGHSS VVTCVRVHPV FTVVVSGSED GSVKVWDHES GEYIRTLKGH TNTVNGLAFT PTGSHLASCS TDLSIKLWDF QTYACIKTLR GHDHTISSVV FLPFGGDLLT TTKCKRLLSA SRDCTVKVWD LETGFCDQTI HDHNDWVRTL ATRADGSVWA SAGNDTVIYV YEQDRMKKAV ELRGHEQVVE SIAFLTQDTI PKNNAQRPSK HIETVRDYLV SGSRDRTVRL WKVSEASCLM VLKAHDNWVR SVLIHPNGNY ILSSSDDKSI RVFDIKNERC LRTLENAHNH FVSSLDMHAT LPILVSGSVD QTIRCWPLD
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