Gene PHATRDRAFT_17226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_17226 
Symbol 
ID7196068 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp283242 
End bp284475 
Gene Length1234 bp 
Protein Length268 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176559 
Protein GI219109609 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGGCACCTCA GACGTCCATC TGGGCGTCCC ATCTCATCTT GGTTGCTACA GCATGTGCTG 
GCATTTACGC CTTCGTTCAA AAACGGAAAC GCAGTAGCAA GTATAATGTG CCGAGTGATC
TGGTGAACTC GCCGTACGGA AAAGAAGTCG TAGTCGCACT CGAGCTAGCG CTCAAAGCCG
GCCTCAACAT GATTGCCTAT TGTGACGAGA AAGGGACCGA GGCAGAATCC GGTCAAGACC
TAGAGATTAA AACCAAAGGG CAGCCTGAAG ATTTCTGCAC AAGGGTTGAT ATTGAAAACG
AGAATCTTGT CATGGAAGGA CTCTTGAAAT CATTTCCGAC GCACACCATT ATTGGGGAGG
AATCCGTAGG AAACAATCCT TTGCCACCGC TGACGACTGA TCCGACTTGG ATAATCGATC
CGATCGATGG AAACACAAAT TTTGCGTCGG GGCTTCCACT GACCTGCGTC AGCATCGGAT
TCTGTGATAA AAAAAATCCC GTTATTGGGG TAGTCTACGC ACCGATGACA GATGAAGTAT
ACCTGGCGGT GCGCGGATAC GGAGCCTACC GCAACGGCGT AAAAATCACG CAGCGCGAAA
CCAAAGCGTT GTGCGACGCG GTAGTCTGTT TTGAATTTGG GTATGCACGG GACCAGGAAG
CGGTTGACAA AATGGTAGGC GCTGTCAGGA AAATACTGGA ACACGGATGC AGAACCTGTC
GATGTCTTGG GAGTGGCGTT TTGGATCTCT GCTATGTTGC GACAGGCCGT TTGGACGTTG
TTTATGCTGG CGTTGCGGGA GAAGGATGGA AGCCATGGGG TACGTCATCT GGCGTTCTCG
TTTAGAGTTG AAACTCAAAT ACTAACTCGT AACTGTGTTC TATAGACTAC TGCGCAGGCT
TTGTCGTCGC GACGGAGGCG GGGTGCACAA TGCAGCCTAT TGCTCAATTG AGCAAAACGG
ATTTTGACAT TTACTCATCA AGTGTTATTT GTGGAGTGAG TTCAAATTTG GTTCAAGAAC
TCAGGGCAAC GATATCACGC AAATGCATGG CGTTCGCCTG AGGGAGCAAA GCCCATCCAA
TTTCCCTTTC AACTTGCTCG GCAGGACACC CGCCAACTTT CATAAAACTT GAACGATCAT
CTGATAGAAG GTTAGTATAT TTGGCTCTTT CTTAAACGCG AAGTGGCTGT ACTTCCTCAA
CCGTGGATTA TAATAATCCA ACTCATTGGA AGTC
 
Protein sequence
MIAYCDEKGT EAESGQDLEI KTKGQPEDFC TRVDIENENL VMEGLLKSFP THTIIGEESV 
GNNPLPPLTT DPTWIIDPID GNTNFASGLP LTCVSIGFCD KKNPVIGVVY APMTDEVYLA
VRGYGAYRNG VKITQRETKA LCDAVVCFEF GYARDQEAVD KMVGAVRKIL EHGCRTCRCL
GSGVLDLCYV ATGRLDVVYA GVAGEGWKPW DYCAGFVVAT EAGCTMQPIA QLSKTDFDIY
SSSVICGVSS NLVQELRATI SRKCMAFA