Gene PHATRDRAFT_17187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_17187 
Symbol 
ID7196040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand- 
Start bp155847 
End bp156586 
Gene Length740 bp 
Protein Length193 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177029 
Protein GI219110555 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.095057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTCATCGATT GCACTATCTT GATACGTTTC TGAGCAAGTA GGATGCTGTC TCAGTTGCCT 
CGCGCAGCGA TTCGTTTGCT GCCTCGTCGT CAACCTAATC TTCACTGCTA TCGGTACCAC 
TCAAAGCCCA CGAGCCTGAC TGCCCAAGCC GGACGTGTAC ATCGAGTATT GAGTGCCAAG 
GCTGACTCGA ATTTGACCTA CGACGATCTG GCGACGTGTT TGGGGGTAAC CAATACTTAT 
GCTGCGCAAT TACTACTGGG CCAAGCTAAA TTGACACCAG AGACGGCGAA GAAACTACGC 
GCAGCACTTC CGGCCGTCTC GGACGACGAT TTAGAGGATA TGCAAAATTC ATTCCCTATG 
CGATCGTACG ACGACGAAAT ACTAAAAGAG CCGCATGTTT ATCGGACGTA TGAAGCTATT 
ACGCATTACG GAGAAGCAAT GAAAGCAATC ATAAATGAAC AATGCGGAGA TGGTATCATG 
AGTGCGATCG ATTTTTATTG CGACGTGGGA ACGAGTATTG GCAAACACGG TGAGAAGCGT 
GTCGTGATCA CCTTCAACGG TAAATTTCTA CCGTTCATTG AACAGAAAGC GGAAGATAAC 
GGAGCCATGA GTCCAAGAGA CTAATGGATT TGGGTTTCTG TCGTAGGCTT ACGGGATGCC 
CGAAACAACT CACTATCCAT GAAAAGAAAA TGTAGTCTTT CGTGAAATAT CACGATTATT 
GGGAACTACG CTTAGACTTT
 
Protein sequence
MLSQLPRAAI RLLPRRQPNL HCYRYHSKPT SLTAQAGRVH RVLSAKADSN LTYDDLATCL 
GVTNTYAAQL LLGQAKLTPE TAKKLRAALP AVSDDDLEDM QNSFPMRSYD DEILKEPHVY 
RTYEAITHYG EAMKAIINEQ CGDGIMSAID FYCDVGTSIG KHGEKRVVIT FNGKFLPFIE 
QKAEDNGAMS PRD