| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_1358 |
|---|
| Symbol | |
|---|
| ID | 7196399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | + |
|---|
| Start bp | 1085661 |
|---|
| End bp | 1087106 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002176719 |
|---|
| Protein GI | 219109933 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00300425 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATATTTGCCA ACAATTATGT GGACCTCGGC AAAGTTGACA CGGTAGGATT TGATTATGAC
TATACCCTTG TTACGTACAC GGAAAATCTT TTGGAGCTTC TTTACGAAAT GGCTCTGGAA
CGATTGGTTG ATGATAGACA GTACCCAACT GAAATGCTGA ATGTCGGATT GAAGTTTGAT
CCTTTTTTCT CAATCCGAGG GTTGGCTGTG GATAAAGAGA CGGGATGGAT ATGCCACTTA
TCGTATACAC ACAAGGTCGC CGTGGCATGG GAAGGCCGAG AAAAGCTCCC GACATCTCGC
ATTTACAAAG AATACCGAGG CAAACGAGCT CTTACGCCTT CTGAGCGGCG AAAGCGTCTC
AAACCATTGA ATGATCTTTT CAGCATGGCA GAATGCTGTC TCATTGCAGA CACAGTTCAA
TTTTTCAAGG AACGCCAAAT TCCTTTCTGC CCACAAAATG TCGTTACCGA TGTTTTGTCT
GCCATTGGTG GAACCCATAT TTCAGGCGAC TTTCATCGTC TCGTTGCCCA AGATCCTGGT
GAGTGAAGAC ATTGAATCCG GCTGATGTGA AACGATTGCT TTTCTCAAGT ATCACATTTC
TTAACAGAGC GGTACTTTGA TCCCACGCCA CATCTCAAAC AAGTGCTTGA TACGCTGAAA
AATTCCGGTA AGCATCTCAT TCTAGTTAGC AATTCGCCGT TTTGGTACGT GGACGCCGGG
ATGCGATACG TCCTCGGAAA TAACTGGAGG GACGAATGGG ATGCCATTAT TACCAGCGCT
GGTAAGCCAA TGTTTTATAC AGATGACTCC CGGCCGTTCC GAGAAATATG TCAAGAAACG
CGCCGACTTA TGTTTAAACG AGTAGAACGC TTTGAGAGAG GTAAAGTATA CACTGAAGGA
TGTTTGAAAG AGCTGATGCG ACTCATGGAT TGGACCACGG TAGAAAATAA GATTGAAAGC
AAAGATACAT GGGGTATCTC TAGTGGGTCT CTAGATATGG CAACGGCGAA CGTTCTTTAC
GTTGGTGACT CGCTTTTTGC TGATCTAGTT GACGCAAAAC GAGAATTCAG CTGGACAACT
GCAGCCGTGA CTCCGGAAGT GGGGTACGAA ATGGAGCTGC AAACGGAAAC TGATTTTGCC
TTGGCACGAC GGACCATTGA CTTGCTACTT CATGCGCTCC GCCTGCTGCA AGACGAACTC
GGCACTTCAT TGCGAACGGC TGAAGATGTA AAGGTGCTCG ACTGCCTGGA GCGACTAGTA
TCTGTGTGGC GGGACCGCGA ATCTGATGTT TTGGGCAATC CGTTTGGTAG TGTCTTCCGG
GCGAGATATC AACCGTCATT GTTTGCTCAT TCACTCAGGC GTTATTGTGA CCTTTACATG
ACTTCCGTTA GTAGCCTACG ACACTACAGC CCACAACATC GTTTTTACCC AGAGCAAAAT
CATCTG
|
|---|
| Protein sequence | IFANNYVDLG KVDTVGFDYD YTLVTYTENL LELLYEMALE RLVDDRQYPT EMLNVGLKFD
PFFSIRGLAV DKETGWICHL SYTHKVAVAW EGREKLPTSR IYKEYRGKRA LTPSERRKRL
KPLNDLFSMA ECCLIADTVQ FFKERQIPFC PQNVVTDVLS AIGGTHISGD FHRLVAQDPE
RYFDPTPHLK QVLDTLKNSG KHLILVSNSP FWYVDAGMRY VLGNNWRDEW DAIITSAGKP
MFYTDDSRPF REICQETRRL MFKRVERFER GKVYTEGCLK ELMRLMDWTT VENKIESKDT
WGISSGSLDM ATANVLYVGD SLFADLVDAK REFSWTTAAV TPEVGYEMEL QTETDFALAR
RTIDLLLHAL RLLQDELGTS LRTAEDVKVL DCLERLVSVW RDRESDVLGN PFGSVFRARY
QPSLFAHSLR RYCDLYMTSV SSLRHYSPQH RFYPEQNHL
|
|---|
| |