Gene PHATRDRAFT_107 details

Gene Information

• Locus tag: PHATRDRAFT_107
• ID: 7196818
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: -
• Start bp: 1779747
• End bp: 1785992
• Gene Length: 6246 bp
• Protein Length: 601 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002177369
• Protein GI: 219111235

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.799153
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGGACATG TGCAGAAGAT CGATTTGTCT TACAATCATC TGGTAGGATC TCTACCTGCG 
GTGACCTTCG AGCTTCCCTA TTTAGAAAGT CTGGTTTTGG ACGCGAATAC TGATTTGACT 
ATTGAATTCG ATGGGATTGC GAACGCTCAG TTCCTCCAAA CTCTTGTTTT AAGCAAAACG 
AACGTCAAGG CATTGGACGG CATTTCGGCA GCGATAAGCT TGGAGGTTTT GCACCTAACT 
AATCTTGGTT TGCGTGGGCC TCTTCCGGAG GAGCTGTTGC GATTGACAAA TTTGCGATCA 
CTCCTTGCGA ATTTCAACCA CTTTACGGGT ACTCTGCCTC AAGCAATTGG AGACTTGACG 
GGATTGCAGG AGTTGCTCCT CTACGAAAAC GATTTGACTG GCGCAATTCC ATCTACTCTT 
GGTAATCTTA TTCATTTGCA GACGTTGAAT TTAGCTCAGA ACGCGCTCGG CGGTGAAATT 
CCAGTCGAGT TGGACAGGTG TACGGAACTG GAAAGTTTTG CGCTTCATCG CGTCTTTGGA 
AGTGAAAAGG GACCAGGCTT GTCAGGGAGC CTGCCAGCTT TCTCGAGCCT GTCTAAAATC 
AAAGAATTGT ATTTGCAGAA CCATCAGCTG AGTGGGACCA TTCCCGAAAA CTTTCTGGCG 
TCTGCGTCGC CATTTGAAAC AATCAAAGTA GACTTGTTCA GTAACGCCCT CACTGGCGCT 
GTTCCTCCCT CTCTTTTGAT AAAGCAACGC ATGAATCTCT ATTTGGCTGA CAACAGCATA 
ACGCTGTCCT CTTCCTTCTG CAATTTTATA CCCCCGGACT GGATGAGCGG AACAGTCGCT 
TTGCAAGGAT GCGACGCGTT TTTGTGCCCA AACGGTCAAA GGGCATCGTT CGGTCGAGCG 
ACGCAGTCGA GACCATGCAC CCCTTGTCCC GGAGCACAGT ACTGGGGGAC GACGACTTGT 
CCGACTACGG TTGTGGGCTC CGACGAAGAA CGTGCCATCA TGACGGAGTT TTACGAAAAA 
ATGGGTGGGC GTTTTTGGAA GAATTCAGAC AATTGGTTAA ACCCAGCTCT CTCGCCATGC 
TCGTGGTTTG GCATTGAGTG TACCACGGAC GGACATATTT CGGCAATTCG ACTCCGGAAC 
AATGATATGA CGGATTCTGG TAGCTATCCT TCTCTTTTTC GACTCCCAGA GCTGCGGATT 
CTCGACCTGA GCGCAAACTC AATCAACTTT CGGTTCGAAG GAATTGAAAA CGCGACCAAA 
TTGGAGGAAC TTGTCTTGAC CCAATCGGAT TTGACTTCTT TGGACAACAT TGGAAGTATC 
GTTTCATCAA ACATTCGAAG ATTGTCATTG GCGTCGAATC AGCTTGAAGG CGCTGTACCG 
GAAAGTCTTT TTCAGATGAA GGTGCTGGAA GACCTCGATC TTTCGCACAA TAAGTTTAGC 
GGTATTCTAT CTTCGAGTAT TGGACTCCTA ACAAACTTGA AACGTCTCAA GATCTCCGGC 
AACTCGTTGA CCGGAGCGTT GCCGACAGAG CTTGGAAGTC TGTCGGATCT CATCGAAATT 
GCTGCAGCTG AAAATTCATT TTCGGGAGAG CTTCCCACCT CGCTTGGCAA TCTCTCGCTC 
CTGCAAATCT TGTCAATCCG TCAGACCGCG AGTGTCGGCG ACCTTACAGG TACATTGCCC 
TCGTTTTCCG GGCTTGAGCA GTTGACAAGT TTACAGTTGG GAGGAAACTT TTTGACGGGA 
AGTTTGCCTG TCGAATTTCT ACAAGCAACT AAGCGAGGCA ACGACCGCAT AGAAGTACTT 
CTCAGCGGCA ACGCATTCGA AGGATCGGTT CCTTTGAGCT GGGCCAGTCG CTTTGGTAAC 
TTGGTGTTGG ATCTAGCTGG AAATCGTATT ACGAGTCTTG ACGATGGGAT CTGCGACCAG 
CAAAACTGGA ACGATGGGCT CGTTGGAACT TATGGCTGTA ACGCAATTCT TTGCCCTATT 
GGGTCGTTCA ATGGTTTCGG GCGGCAGACT TTTTCGGAGT CTATATGTTC TCCTTGTGCT 
CAGGCTCAAG TAATGGGGGT GACGAAATGT GGAGGCAACG ACTCGTTGGG AGATGAAGCA 
GAAACTTTGA TCATTCTTCA AGACCTTTAC TTTTCAACTC ATGGAGACAG CTGGTTGAAT 
AATAGTGGAT GGACTTCTAC GACCGATTTC TGTTCTTGGT TTGGAGTGAC ATGTAATGCA 
GTCGGTGAGG TTGTTAAGAT CAATTTGGAG AACAATGGCC TCACAGGAAC TCCTTCTCGT 
TCAATTTATA ATATCACTTC GCTGGAAGCA CTCAATTTTC AGCAAAATGC TGTATTGTTT 
TCTTTCAACG GTATCGCCAA AGCAACAAAT CTCCGGAGTC TTGACTTGTC AAGCACAAAC 
CTTGATTCTG TTTCTGGAGT TGGCCAGTCT TCTAGTTTGA GTGAGCTTCG TCTGACGGAC 
AATGACCTGA CCGGGCCCTT TCCGCCAGAG ATTCTGCAAT TATCAAACTT ACGGCAACTC 
TTTTTAAATT TTAACGCGAT TGAAGGGCCT TTGCCGATTG AGATTTCGTT GATGAATAAC 
CTTGAGGACC TCTTTCTACT CAATAATAGG TTTTCTGGTC AGCTCCCCGC CAGCATTGGT 
TCTCTTTCTA GTCTGAAGAG ATTGGCTTTA TCAGATAACA ATTTTGAGGG TTCCATACCG 
CCCGAACTGA ACAACCTCTT ATCCCTCGAG CTCTTTGCCA TTCAAAGAGA AAATGGAAAA 
GGAAATAATG ACATTGATGC GATTATCGGA ACTAGCGCAG ACGCCGGGAG AGGCTTGACA 
GGGCCTTTGA TATCTTTTGA TCGGCTGTCA AACTTAAAGC AATTATATCT CAGCAGAAAT 
AGCCTGACCG GCTCCATTCC TCAAAATTTT CTCGATAGCA ATCAAGAAAA ATCAAGTATT 
GAAGTAGATC TCGCGATGAA CAGGTGAGAC TTACAACTCG TTGATCAATA TAATACTTTA 
TGAACTGATC TCACACAGCA TTATGTCTCA CCAGACTGAC GGGCGCAATT CCTGCTTCGC 
TTGCCCGATT TGAAAACATG TCGTTATACC TCTCAAGCAA CATGATAAAT GATATTCCTG 
ATGGTGTCTG TCGGCAGAAT AACTGGATGA AAGGCACGGT TGACTTGTAT GCATGTGATG 
CGATTCTATG TCCACCCAAC ACGTTTAGCC TGTTTGGTAG GCAGGAAGAT GCCTCGTCCG 
TATGTGAGAC GTGCCCAGAA GGATCGTCGG CACCTTATTA TGGAAGTGTT ATGTGCGATG 
ATGCAGATGA CCAGCTTCTT TTAGGGCAGA GAGATGTACT TGAGCAATTG TACACCGAGG 
CCGACGGAGA CAACTGGAAA TTAAATGACA ACTGGATGAA TTCCGATATA GAGTTTTGCT 
CCTGGTACGG TATTGAGTGT GATAGCGATG GCTTTGTAAA GAGTATTGAC CTGATGCAGA 
ACGGACTTCA GGGAAAAATT CCGACGTCAG TGTACAGTCT GCCGCGGTTG CAGGAGATTA 
ATTTCGCATC GAACGGAATT GAAATAAGCT TTACAGGGAT CAGTGAGACG CGAAGCCTAT 
CGTATATCAA TCTCGACTAT ACTGGATTGA GCTCGTTGAG TGGAATTGAA AAGGCTTCCA 
GTCTCAAATT GTTGCATTTA GTCGGCAACG AATTGGGTGG TGTATGGCCG ACTGAAATTA 
CCGCTCTCAA AAGTCTTCAA ATACTGTACC TATCTGAGAA TGATATTGGA GGTGCTTTGC 
CTGCAGCGCT AGCAGAATTG TCAGATCTAG AAGTCTTTGC TTGTGTTGAA TGCGGCTTAA 
AAGGAACGCT CCCTACTTCA GTTGTGTCGC TCAAAAAATT GGAGTACCTG AACCTTTCCA 
GAAATTCCTT TTCGGGGCCT CTTCCGCTGG AGCTAGAATC CTTGCTGTCA CTGAAGTACC 
TTAGTCTCTC AGAGCAAATC TCCTCCATCA GCAACGGATT GACTGGACCG ATACTGTCAT 
TTCAAAAAAG CCTGAACTTG ACAGATCTCC ATATTCATAA AAATCAGCTC TCAGGAGCAA 
TTCCGAGCAA TTTTCTGCAA AATGTTAGTT TGTCTCAAGA AGTCCGTATC GACCTGCATT 
CCAACAGACT CAATGGTACA CTCCCCCTCG AGCTTGCTAG ATTCGACAAA ATGACTCTTG 
ATCTTGCAGA CAATAAGATA GAGGGAATTC CACAAGGTCT CTGCGAAAAG TCTTGGAATG 
AGAGGAATGC CTTGCCGTCC GGAGACTCCT GTGATTTCAT TCTGTGTGGG GCTGGCTCCT 
TCAACGGGAT AGGTCGCGCA TCCGCTTCTC TTCGATGCGA GCCCTGTCTG ACAAGGTCGG 
ACGCCCAATT TTTTGGACAA ACATCGTGTG GGCCAGATAT TGAACGTGAT GTTCTCAATT 
CTCTGTTCCG CGACCTGTAT GGTTTACAAT GGAAGCGAGC TGATGGATGG GGTAGCACTG 
CTAGTGTATG CAGCTGGTAT GGCGTGGATT GCTATTTAGG AGGCGATCAT AATGAGCTTG 
TTCGAAGTAT TGTCTTGGAC AATAATAATC TGGTTGGGAC AGTGGGTTCC GGAATATGGC 
TCCTCACACA ATTGATTGAA CTGGATCTCA GTGAAAACCA AATTGACGTG GACTTCGATT 
CGGTGGGAGG TGCTTCAAGT CTAGAACTAC TGCGCTTGTC GCAGACAAAC ATCACTTCAA 
TAGTCGGACT CGGCTCGTCT ATATCTCTTA GAGAGCTCGA GTTGGCCTCT CTCGGATTGA 
CGGGATCTCT ACCGGAAGAT TTTTTTAAGT TGGAATCTTT GGAAAGACTA GTCCTTGATC 
ACAACAACTT GTCAGGCGAA GTCTCCAGGT CAATAGGTGA TCTTTCCAGT CTGGAGGAGC 
TCTACCTCGG CAATAACGGA TTTTCTGGAC CGATACCAGA TATGTTTGGT TCGATCTCCC 
GTTTGCGTGT TCTTTCCATC GGCGGAAACA AGTGGACGGG CGAGGTAAGA GACCCTTTGT 
TCGCAGGGAG GGAGGTTACA TTCCATAAGG AACTTCGTTG TCTCACCTTT CTGTTAGATT 
CCTTCGAGCC TAAGTTTTTT GTCTTCTCTT GAAGTGTTGT CCATCGAAAG ACAACCGGAT 
GAGCTTGCTG GTGAACCTGG GTTGGTCGGG AGTCTCCCAG CATTTCATCG AGCGCCACGA 
CTTCGCGAGC TTTATCTAGC AGCGAATAGT TTGGGGGGCA CTATCCCCTC AATTTTCCTA 
TCTGGACACT CGGACAAGAG CTCCGAAGTC ATTGTTGATT TACAGCAAAA CCTCGTACAC 
GGTGCAATCC CAGAAGTTCT TGCTGATTTC AGCCAGATGC AACTTCTTTT AGGAGGGAAC 
AGGATCAGTG CTGTCCCGAA TTCAGTGTGC GAAATGAAGG ATTGGATGGA TGGTCTTTTG 
CAATCCGGCT GTGATGCCTT ACTTTGTGGA CCGGGTACTT TTAATACCAT CGGACGCCGG 
ACGTCGACTG AAGACTGCCA ACCTTGCACC TACCGTGCCT CAGCGCTTTG GTACGGGAGC 
ACACGCTGTG GCGCCATCTC ACCTGAGCAA CTTACCCAGG AAGAAATCTT GAGAGAGTTT 
TTCGAAAGGA CAGGAGGGAA CGACTGGAAA AAGGCAGACA ATTGGTTACA AAATGGGATT 
ACTGTCTGCG AATGGTTTGG TGTTGATTGC GAGCCGAACT CCGAGGGAAA GGATGATGTT 
GTCAAAATTG AGCTCAGCGG CAACAATTTA TCCGGAACTA TCCCGTCTTA TATGTTCTAT 
CTCCCTTCTC TCCGAGTTCT CAACCTTAGC GGAAACAGCG TTACCATGGG ATTCGGGGAC 
ATCAAAGATT CGAAGTCACT GAAGGAGCTT TACATCGATT CCACGAACGT TATATCCCTC 
GAAGGCCTAA ACGAAGCCAC AAATCTTCGT GTTCTCAAAA TGGATAATAC GGCATTCAAT 
GGCCGGCAGA TTCCGACCGA ATTGTACTCG CTGACCGCGC TGGAATTCCT CGACATCGCT 
CAATGTGGAT TTACGGGCAC TTTGTCGCCT TCCATAGAAA ACTTATCCAA TTTGAAAGCA 
TTTGTTGCTT CTCACAATGA TTTGAGCGGA CTCATCCCAG ACTCAATTGC GAGCTTGACT 
GTTCTTCGCA ACCTTCTACT GTCAGAGAAC AACTTTTTTG GGCCCCTAGC TCCGCTTGAA 
AGCTTA 

 

Protein sequence

LGHVQKIDLS YNHLVGSLPA ALDGISAAIS LEVLHLTNLG LRGPLPEELL RLTNLRSLLA 
NFNHFTGTLP QAIGDLTGLQ ELLLYENDLT GAIPSTLGNL IHLQTLNLAQ NALGGEIPVE 
LDSIVSSNIR RLSLASNQLE GAVPESLFQM KVLEDLDLSH NKFSGILSSS IGLLTNLKRL 
KISGNSLTGA LPTELGSLSD LIEIAAAENS FSGELPTSLG NLSLLQILSI RQTASVGDLT 
GTLPSFSGLE HELRLTDNDL TGPFPPEILQ LSNLRQLFLN FNAIEGPLPI EISLMNNLED 
LFLLNNRFSG QLPASIGSLS SLKRLALSDN NFEGRCLASS LKLLHLVGNE LGGVWPTEIT 
ALKSLQILYL SENDIGGALP AALAELSDLE VFACVECGLK GTLPTSVVSL KKLEYLNLSR 
NSFSGPLPLE LESLLSLKEL ELASLGLTGS LPEDFFKLES LERLVLDHNN LSGEVSRSIG 
DLSSLEELYL GNNGFSGPIP DMFGSISRLR VLSIGGNKWT GEIPTELYSL TALEFLDIAQ 
CGFTGTLSPS IENLSNLKAF VASHNDLSGL IPDSIASLTV LRNLLLSENN FFGPLAPLES 
L